Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0884 ATGAGGAAAAATGTCGGTTCTCATTCAGGAAGGATGTTTAGTGATAAGAAGTGGATTCTCCCCTTTTTTGCAAGTTTGATTATATCTATGAGTCTAGTTCTGACAGCCATTCTTGGATTACTTAGTTCTGATGGCGGGGGAGAGCAGTCACCATTTGAAATCATTTCCTTCAAGAGATCAGAGGATTCAAGTGGATATTTTGTGGAATCAGATATAGAGAAGTCCTTAAATGTTAGTGTGGTGAAAAGGGAGGCACCAAGGTTTGCATATCTTATTTCAGGCACCAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTGTACCACCCGAGGAATCAATATATCTTGCACTTAGATCTTGAGGCGCCACCCCGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAATATTTCGTGGGGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACGATGATTGCTTGTACCCTCCAAGCTATTGCAATATTGTTGAAGGAAAGTTCAGAGTGGGACTGGTTTATTAACCTCAGTGCCTCAGATTATCCCCTTATGACACAGGATGATTTGCTTCATGTTTTCTCAAATCTGTCAAGAAATCTCAATTTCATTGAACATACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCCATCATTATTGACCCTGCTCTTTACTTATCAAAGAAATCTGATTTAGCATTGACTACTCAAAGAAGAACACTTCCAACATCTTTTAAACTGTTTACTGGTTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTACTGCATATGGGGATGGGATAATTTTCCACGGACTATGCTAATGTATTATACAAATTTTATCTCCTCGCCAGAGGGATATTTTCACACTGTCATTTGTAACACTGAGGAATTCCATCACACGGCGATAAACCACGATCTTCACTACATTGCTTGGGACACTCCTCCAAAGCAGCATCCCATCTCTTTAACTGTGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCACTCTTTGCGCGCAAATTTGCAAAGGAGGATCCAGTGTTAGACAAGATTGACAAAGAACTTCTGGGGCGCACACATAGATTTTCACCTGGTGCATGGTGTGTTGGGAACACAGATGGTGGGGCTGACCCTTGTTCTGTTCGTGGCAATGATACAATGTTTAGGCCAGGACCTGGTGCTGAGAGGCTACGTGAGCTGCTTCAGGTGCTGTTATCTAAAGAATCTCTAAGCAAGCAGTGTTTGTGA 1299 0.4234 MRKNVGSHSGRMFSDKKWILPFFASLIISMSLVLTAILGLLSSDGGGEQSPFEIISFKRSEDSSGYFVESDIEKSLNVSVVKREAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFRGVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLMTQDDLLHVFSNLSRNLNFIEHTRIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFISSPEGYFHTVICNTEEFHHTAINHDLHYIAWDTPPKQHPISLTVKDFDKMVKSKALFARKFAKEDPVLDKIDKELLGRTHRFSPGAWCVGNTDGGADPCSVRGNDTMFRPGPGAERLRELLQVLLSKESLSKQCL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0884 432 PANTHER GLYCOSYLTRANSFERASE 5 425 IPR044610 GO:0015020
Gso12g0884 432 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
Gso12g0884 432 PANTHER BNACNNG43180D PROTEIN 5 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0884 Gso-Chr12 9892231 9897042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0884 81 431 Glycosyltransferase AT1G03520 77.778 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0884 - - gmx:100795146 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0884 12 9892231 9897042 Gso12g0884 12 9892231 9897042 ECH
Gso12g0884 12 9892231 9897042 Gso6g2440 6 46097843 46103041 GST