Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2438 ATGGCTTCCCAACACGAAAACGGGTCGATTATCGATCCGAATCCTTTTGGGGTGGAGACAGTAATGGCTTCCCAGCACGAAAACGGGTCGGAAATTGACCCGAACCCTACTGTGGTGGAGACAGCAATGGCTTGCCTTCACGAAAAAGGGTCGGAAATTGACCCTAACCCTACTGGGGTGGAGGCACATGAAGCGGAGGCTGAAAAGTTTGGAACTTTGGGTTGTGCTGTTCCTATTGAGGAAGGCTTGGAGAATATCACTTTGGTGGGTCCTTCTCTTTCAGTTGAGGAGAACCTTGTTAAGGATGATAGTGAAATTGAAATTGAAAGTGAGAGTGAGAGTGAAAATTCTGAGTCTGAGAGCTCTTCTTCTGATTCTGGTAGCGGAAGTAGTAGTAACAGCAGCAGCGGTAGTAGTAGTTGTAGTGATAGCGAGGACGACGATGACGATGATGTGGAAGTTGAAGAAGGTGAGATAAGTGATTCTGATGAAGAGAAAATGGTTAGTTGGAGCATTGTTGATGAGGATGGTGATGAAGATGGTGATGTGGGAGGAGGAGGTGGACCGATCAGGTCAAAGAATGAGCTTCAGAATCTGCCTCCTGTTCCTCCCGTAGATGCGATTTTGGAACCACACCATCAAACGGTGCCAGTTGGAATTGTTATGTCGACTCTTGGTGCTCAAGTCATCGTGGAAGGAGTGGAGAAGCATGACCCTCTCAATGAGGGTTCTATTCTTTGGTTGACTGAAAGCCAAAAACCACTAGGTTTAATTGATGAAATTTTTGGACCAGTCAAGAACCCTTATTATGTTGTGAGATACAATTCTGAAAGTGAAGTCCCCACGGGGATCAATGAGGGAACCTTGATCTCCTTTGTTCCAGAATTTGCTGATCACGTGATTAATAACAAGGATCTCTATAGGAAAGGGTACGATGCATCTGGCGCAGATGATGAAGAGTTGTCTGATGAAATGGAGTTTTCAGATGATGAGAAAGAGGCTGAATACAAGAGAATGCAAAAACAGACAAAGAGGGGTGCAAACGATCAAAATCATGGCAAGAAAAAAAACAACAGAAAGAAATTTTCACCGAAAGATGTTGCTGCACCTTCTGCACCTTCTGCACCAGCTGCACCTTCTGTGCCAATGCTTCATCATGGAAATTGTCCTCCTTTTTCAAGCATTGCACAAGGTCATTTGGGTGGAACTACCCCACTTCCACCCTTAAACGCAGCTCCAAACTTTGCTACGAATGGAGTCTGGACAACTGGAACAACATTTCCACATCAGCAACAGTCTCCCATGCTTCCTAATGGATTTCCTACAAATGGCATGCCATGGTACCCACAAAATCCTCAAATTTCTCCTCAGTTTCCTATGCCAGGAATTCCATTTCAACAGCAATTACATCCCAATCAGGGATCTCTTCCCACAACTATGCTACCTGGGATGCAGCTCAATATGTTTGCTCAATCCCAATATGCAGCAGGACTTGCTGGTCAAAATCAAATCGCATTTGGGATGGGTTCACCCTTCCCACAGAGTCAGCCACCTATATTTGCTGCACAGCAGGGTTTTCCATCCACTGAATTGCGTTCAGAAAGAAACATGAATTTTCATTCTAATGGTGCCCCCTCTCAATTTCATTCGCGTCCAAATGCTAATCGTGGGAGAAAAACATTTCATGGTGCAGGTAGGAAAGGGTGGCGTCCACCCAAGTGA 1722 0.4512 MASQHENGSIIDPNPFGVETVMASQHENGSEIDPNPTVVETAMACLHEKGSEIDPNPTGVEAHEAEAEKFGTLGCAVPIEEGLENITLVGPSLSVEENLVKDDSEIEIESESESENSESESSSSDSGSGSSSNSSSGSSSCSDSEDDDDDDVEVEEGEISDSDEEKMVSWSIVDEDGDEDGDVGGGGGPIRSKNELQNLPPVPPVDAILEPHHQTVPVGIVMSTLGAQVIVEGVEKHDPLNEGSILWLTESQKPLGLIDEIFGPVKNPYYVVRYNSESEVPTGINEGTLISFVPEFADHVINNKDLYRKGYDASGADDEELSDEMEFSDDEKEAEYKRMQKQTKRGANDQNHGKKKNNRKKFSPKDVAAPSAPSAPAAPSVPMLHHGNCPPFSSIAQGHLGGTTPLPPLNAAPNFATNGVWTTGTTFPHQQQSPMLPNGFPTNGMPWYPQNPQISPQFPMPGIPFQQQLHPNQGSLPTTMLPGMQLNMFAQSQYAAGLAGQNQIAFGMGSPFPQSQPPIFAAQQGFPSTELRSERNMNFHSNGAPSQFHSRPNANRGRKTFHGAGRKGWRPPK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2438 573 MobiDBLite consensus disorder prediction 313 383 - -
Gso6g2438 573 MobiDBLite consensus disorder prediction 99 198 - -
Gso6g2438 573 MobiDBLite consensus disorder prediction 532 554 - -
Gso6g2438 573 MobiDBLite consensus disorder prediction 331 353 - -
Gso6g2438 573 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 24 562 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Gso6g2438 573 MobiDBLite consensus disorder prediction 142 162 - -
Gso6g2438 573 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 24 562 - -
Gso6g2438 573 Pfam Gar1/Naf1 RNA binding region 216 297 IPR007504 GO:0001522|GO:0042254
Gso6g2438 573 MobiDBLite consensus disorder prediction 102 118 - -
Gso6g2438 573 SUPERFAMILY Translation proteins 217 278 IPR009000 -
Gso6g2438 573 MobiDBLite consensus disorder prediction 119 141 - -
Gso6g2438 573 Gene3D Probable tRNA pseudouridine synthase domain 187 293 IPR038664 -
Gso6g2438 573 MobiDBLite consensus disorder prediction 532 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2438 Gso-Chr6 46074332 46076988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2438 K14763 - gmx:102661630 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0886 12 9949601 9952285 Gso6g2438 6 46074332 46076988 GST