Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2400 ATGTTGTATAAGGTGTGCAAGAGGTACAGAATCATGGTGAGTGGAAATGGCTTGTTTTACCCCGTTGTGGGGTTTGCATCGATCGTGCTGTTCATTTACATGTCTTTTGGGGACGTGAGGTTTGGTTTTGAGGAAGAAGCTGAATTGGCTTTTGTGGAGAGAAATGGGACTCAGTTTATGGTGGATGGAAAGGCTTTCTACATTAATGGATGGAACTCTTATTGGTTAATGGTTCAATCTGTGGATGAGTATTCCAGGCCAAAGGTACGTGAAATGCTTAGGTCTGGGGCTAAGATGGGGCTCACTGTGTGTAGAACTTGGGCCTTCAATGATGGTGACTACAATGCCCTTCAGAGTTCCCCTGGTGTGTTCAATGAACAAGCTTTCAAGGCCTTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTAGGCTGCTCCTTAGCTTAGTCAATAACTTGCATGCATATGGTGGGAAGACTCAATATGTCAAATGGGCATGGCAAGAAGGGGTTGGCTTAAGCTCATCTAACGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTATGTCAAGACAATTTTGACAAGGAAGAATACTATAACTGGAATTGAATATAGAAATGACCCCACCATTTTTGGTTGGGAATTGATTAACGAACCTCGGTGCCTAACTGATCCTTCTGGCGATACTCTCCAAGATTGGATAGAGGAAATGTCAGCTTTTGTCAAATTGATTGACAAGCGCCATCTTGTGACTGTTGGACTTGAAGGTTTCTATGGTCCTAATGATCCGAAAAGATTGACTGTGAACCCTGAGGATTGGGCATCTAGACTTGGATCTGACTTTATAAGGAACTCCAAAATCTCAAATATTGACTTCACCTCTGTCCATATCTATCCTGATCACTGGTTTCATCATCAGGTATTTGAAGACTACATGAAGTTTGTCTCCAAGTGGATGCTTTCCCACATCGAAGATGGTGATAAGATATTGAACAAGCCAGTCTTGTTCTCGGAGTATGGATTGTCAGACATAAATTTTACGATGCCTGAACGAAAAACAATGTACAAAACAATTTTAGACATAAGCTACAAATCTGCAAAGAGAAACAGGTCTGGAGCAGGTGCTCTAGTATGGCAATTCTTAGTTGGAGGAATGCAGGAGTTTACTGATGATTTTGGGATCATCCCATGGGAAAAGACACCTATCCCTTCACTATTTGTTGAACAATCATGCAGATTGACCAAGGTCAAGGAATGGCCTCACAAGGACACAAGTTTTAAACAATTTTGTTAG 1311 0.4127 MLYKVCKRYRIMVSGNGLFYPVVGFASIVLFIYMSFGDVRFGFEEEAELAFVERNGTQFMVDGKAFYINGWNSYWLMVQSVDEYSRPKVREMLRSGAKMGLTVCRTWAFNDGDYNALQSSPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRSYFKNYVKTILTRKNTITGIEYRNDPTIFGWELINEPRCLTDPSGDTLQDWIEEMSAFVKLIDKRHLVTVGLEGFYGPNDPKRLTVNPEDWASRLGSDFIRNSKISNIDFTSVHIYPDHWFHHQVFEDYMKFVSKWMLSHIEDGDKILNKPVLFSEYGLSDINFTMPERKTMYKTILDISYKSAKRNRSGAGALVWQFLVGGMQEFTDDFGIIPWEKTPIPSLFVEQSCRLTKVKEWPHKDTSFKQFC* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2400 436 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 15 436 - -
Gso6g2400 436 SUPERFAMILY (Trans)glycosidases 51 414 IPR017853 -
Gso6g2400 436 Gene3D Glycosidases 48 423 - -
Gso6g2400 436 PANTHER - 15 436 IPR045053 GO:0004553
Gso6g2400 436 Pfam Cellulase (glycosyl hydrolase family 5) 84 385 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2400 Gso-Chr6 45621875 45626135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2400 14 422 Glycoside Hydrolase AT2G20680 71.290 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2400 K19355 - gmx:100806003 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0936 12 11121535 11125766 Gso6g2400 6 45621875 45626135 GST