Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2393 ATGGAGCTCACTATTACACAACCTGATGATTGGCATCTTCACCTCCGTGATGGTTCCCTTCTTCAAGCAGTTCTCCCTCACAGTGCAAAACAATTTGGAAGGGCCATAGTGATGCCAAATTTGAAACCACCCATCACTACCACGTCCGCTGCTGTTGCTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAGATAGCAACTTCAATCCTCTCATGACACTTTACCTCACTGACATGACTACTCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACAACAAACTCCCAAGATGGTGTTACAGACATTTTTGGAAATTGTTTTTCTGTTCTCGAGGAAATGGCTGAGAAAAATTTACCATTATTGGTTCACGGAGAGGTTACAAATTCAAACATTGATATTTTTGACCGAGAAAAAGTCTTCATTGAAACAATTTTAGAGCCTTTAGTTCAAAGACTTCCACAGCTGAAGGTTGTGATGGAGCATATTACTACCGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTATGTAGCAGCAACTGTTACACCACAGCATCTTCTTCTGAATCGTAATGCTTTGTTCCAAAGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTCACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCTCCACATGATAGGCGTAATAAGGAATGTTCCTGTGGATGTGCTGGCATATACAACTCACCGGTCGCTCTATCTCTATATGCCAAAGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTAGAGGCTTTTACAAGCTTTAACGGACCTGACTTCTATGGCCTCCCCAGAAACAAGTTAAAGATTAGACTGAGGAAAGCTCCTTGGAAAGTACCTGATTATTTGTCGTTTCCATTTGGAGACATTGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAGGCATTGCCTTGCTGA 1041 0.4159 MELTITQPDDWHLHLRDGSLLQAVLPHSAKQFGRAIVMPNLKPPITTTSAAVAYRESILKAIPKDSNFNPLMTLYLTDMTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDIFGNCFSVLEEMAEKNLPLLVHGEVTNSNIDIFDREKVFIETILEPLVQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQSGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRNKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKLKIRLRKAPWKVPDYLSFPFGDIVPMFAGETLEWEALPC* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2393 346 PANTHER DIHYDROOROTASE 1 342 IPR004721 GO:0004151|GO:0019856
Gso6g2393 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Gso6g2393 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Gso6g2393 346 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Gso6g2393 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Gso6g2393 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Gso6g2393 346 Pfam Amidohydrolase family 10 320 IPR006680 GO:0016787
Gso6g2393 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Gso6g2393 346 Gene3D - 1 343 - -
Gso6g2393 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2393 Gso-Chr6 45527459 45532095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2393 K01465 - gmx:100804389 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0945 12 11344882 11349049 Gso6g2393 6 45527459 45532095 GST