Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0945 ATGAAACCACATTCTTCGACTGAAATAGTGTTCAAGGAGTGTGTGTGCGCGCGCGCGTGTATTAAGATTCTACTAAAAAAAAGGTTGATCAGCGTAAAGATGGAGCTCACTATTACACAGCCTGATGATTGGCATCTTCACCTCCGTGATGGTTCCCTTCTTGAAGCTGTCCTCCCTCACAGTGCGAAGCATTTTGGAAGGGCCATAGTAATGCCAAATTTGAAACCACCCATCACTACCACGTCTGCTGCTGTCGCTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAGATAGCAACTTCACTCCTCTCATGTCACTTTACCTCACAGACGTGACTACTCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACAACAAACTCCCAAGATGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTTGAGGAAATGGCTGAGCAAAATTTACCATTATTGGTTCACGGAGAGGTTACAGATTCAAACGTTGATATTTTTGACCGAGAAAAAGTCTTTATTGAAACAATTTTAATGCCTTTAATTCAAAGACTTCCACAGCTGAAGGTTGTGATGGAGCATATCACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTATGTAGCAGCAACTGTTACACCACAGCATCTTCTTCTGAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTCACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCTCCACATGATAGGCGTAAAAAGGAATGTTCCTGTGGATGTGCTGGCATATACAACTCACCGGTTGCTCTATCACTATATGCCAAAGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTAGAGGCTTTTACAAGCTTTAACGGACCTGACTTCTATGGCCTCCCCAGAAACAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTGATTATTTGTCATTTCCATTTGGAGACATCGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAGGCATTGCCTTGTTGA 1140 0.4184 MKPHSSTEIVFKECVCARACIKILLKKRLISVKMELTITQPDDWHLHLRDGSLLEAVLPHSAKHFGRAIVMPNLKPPITTTSAAVAYRESILKAIPKDSNFTPLMSLYLTDVTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCFSVLEEMAEQNLPLLVHGEVTDSNVDIFDREKVFIETILMPLIQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRKKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPDYLSFPFGDIVPMFAGETLEWEALPC* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0945 379 CDD DHOase 36 374 IPR004721 GO:0004151|GO:0019856
Gso12g0945 379 PIRSF Dihydroorotase 32 378 IPR004721 GO:0004151|GO:0019856
Gso12g0945 379 Pfam Amidohydrolase family 43 354 IPR006680 GO:0016787
Gso12g0945 379 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 35 375 IPR004721 GO:0004151|GO:0019856
Gso12g0945 379 Hamap Dihydroorotase [pyrC]. 34 377 IPR004721 GO:0004151|GO:0019856
Gso12g0945 379 Gene3D - 34 376 - -
Gso12g0945 379 ProSitePatterns Dihydroorotase signature 2. 279 290 IPR002195 GO:0016812
Gso12g0945 379 PANTHER DIHYDROOROTASE 32 375 IPR004721 GO:0004151|GO:0019856
Gso12g0945 379 ProSitePatterns Dihydroorotase signature 1. 43 51 IPR002195 GO:0016812
Gso12g0945 379 SUPERFAMILY Metallo-dependent hydrolases 35 375 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0945 Gso-Chr12 11344882 11349049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0945 K01465 - gmx:100815210 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0945 12 11344882 11349049 Gso12g0945 12 11344882 11349049 ECH
Gso12g0945 12 11344882 11349049 Gso6g2393 6 45527459 45532095 GST