Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1886 ATGAACGGTCATTGGCTCAGAGGGAACACCAAGAGAATGCGTCGGCGATTGGTGAAGTTCGAGGAGTTGCCGGCGTTCCTGAAAGACAACGAATTCATCTTAGACCATTACCGATCGGAATGGTCGGTGAAGGAGGCATTGTGCAGCGTCTTCATGTGGCACAACGAAACATTAAACATTTGGACGCATTTGGTTGGGTTCTTAGTTTTTGCGGCGATGACGGTGCTCGGAGGTTGTCTCTCGAATATGTTCAGGGAACCGGCAATGGAGTTGCTCACAATGGGGAAGGAAATCAACGGCTCTCGCCCTGCCATCACGGGATTCCTGGATTTGCATTTGAGACACATTTTGGTACCGTCCATCATTCATGAGCTGAGAGATGATGGTGCAGAAACAATTCCTATATGGCCATGGTTCGTTTTCTTAGCTGGAGGAATGGGCTGCTTGGCTTTCAGTACTCTTTCCCATCTTCTGGCCTGCCACTCAAAACCCTTCAACCTGTTTTTCTGGCGTCTAGATTACGCAGGAATTTCTCTTATGATAGTCTGCTCCTTCTATGCTCCAATTTACTATGTCTTTTACTGCAATCCTTACATAAGGACTTTCTATTTGACCTCAATATCTGTGTTTGGAGTCCTAGCTATCATCACCCTTCTTGCCCCTTCACTCTCTTCCCCTCACTTGCGACCCTTCAGAGCATCTTTATTTCTCTGCATGGGATTTTCAGGTGTCATTCCTGCTGTTCATGCTCTTGCAACCCATTGGCACCACTCACATGTTGTCGTTGCACTCGGGTATGAGCTTCTAATGGCCATTCTATATGCCACCGGAGCTGTGTTCTATGTTACTAGAATACCTGAGCGATGGAAGCCCGGGGCATTCGATATTGCAGGCCACAGTCATCAGATTTTTCATGTTTTTGTTGTTCTTGGGGCGCTTGCACACACTCTAGCAACACTACTTGTAATGGAATTTCGACGGGGATCACCCACATGCACCTTTTAG 1005 0.4716 MNGHWLRGNTKRMRRRLVKFEELPAFLKDNEFILDHYRSEWSVKEALCSVFMWHNETLNIWTHLVGFLVFAAMTVLGGCLSNMFREPAMELLTMGKEINGSRPAITGFLDLHLRHILVPSIIHELRDDGAETIPIWPWFVFLAGGMGCLAFSTLSHLLACHSKPFNLFFWRLDYAGISLMIVCSFYAPIYYVFYCNPYIRTFYLTSISVFGVLAIITLLAPSLSSPHLRPFRASLFLCMGFSGVIPAVHALATHWHHSHVVVALGYELLMAILYATGAVFYVTRIPERWKPGAFDIAGHSHQIFHVFVVLGALAHTLATLLVMEFRRGSPTCTF* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1886 334 Pfam Haemolysin-III related 51 315 IPR004254 GO:0016021
Gso6g1886 334 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 2 11 327 - -
Gso6g1886 334 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 11 327 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1886 Gso-Chr6 27667860 27671313 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1886 K07297 - gmx:100809900 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0929 17 8633133 8636094 Gso6g1886 6 27667860 27671313 PCT
Gso6g1886 6 27667860 27671313 Gso17g0929 17 8633133 8636094 PCT