Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0929 ATGAACTATATTCAGACCAAATGCGTGGTTAAGCGCAAAGGCAAAGAAACAGCTGCTGAAACTGAAACCTTGTGTTTTACAAAGTCCAAGGATAACAATAACATGTGCGACCGCCACAGCGGAAAACGCTACCCTTTGTTGTCGTTTTGGGAGCTGCCGGAATACATGAAGGACAACGAATACATTCTACGTTATTACAGAGCTAATTGGCCTTTCAAGCAAGCTCTCTTCAGCCTCTTTCGTTGGCATAACGAAACCTTAAATGTTTGGACCCATTTAATTGGGTTTTTACTCTTTCTTGGATTGACCCTCGCCAATTTAATGAAGCCTACAGTGGTGGATCTCTTGGAACTCTTTACCAGGTCTTTTTCTTCAAGCGCGGAAAAAAATGTTTCTCATAACGTCAAAGATTTGTTTCAGGGAACAACATTACTCTTTGATCTAAATCATCAAACGCCTTTGACAATCGAACTTCAGTCCACAGCACTGGTTATAGCAAGATGGCCATTCTTTGTTTTCCTAGGTGGTTCCATGTTCTGCCTCCTCTCTAGCAGCATGTGCCACCTCTTTTGTTGTCACTCCCGTGACTTGAACCTGTTCCTGTGGCGAATGGACTATGTAGGAATAGTTGTCATGATCATAACCTCCTTTTTCCCTCAAATCTACTATGTCTTCCTATGTGAACCTCACTGGCAAATCATCTACCTTGCTGGGATCACAGCCATGGGACTATTCACCATAGCAACGATGCTCTCTCCGACACTTTCGACTAGCAAATACCGCGCATTTCGGGCCATGTTGTTCTGTTCAATGGGACTTTTCGGCATTGTGCCTGCAATCCATGCATGCTTTGTGAATTGGAGCAATCCTAGACGCAACATTACCTTAGCATATGAAATTGGCATGGCCTTGTCTTACTTGACAGGAACCTTATTCTATGTGACAAGGATACCCGAAAGGTGGAAGCCTGGGTGGTTCGATTTGGCAGGTCATAGCCATCAAATATTTCATGCTCTTGTTGTTGTTGGGGCATTGGCACATTATGCAGCCACTCTTCAAATGCTAGAGTGGCGTGACTCTTTTGGGTGTGACACGGTTCTATGA 1104 0.4393 MNYIQTKCVVKRKGKETAAETETLCFTKSKDNNNMCDRHSGKRYPLLSFWELPEYMKDNEYILRYYRANWPFKQALFSLFRWHNETLNVWTHLIGFLLFLGLTLANLMKPTVVDLLELFTRSFSSSAEKNVSHNVKDLFQGTTLLFDLNHQTPLTIELQSTALVIARWPFFVFLGGSMFCLLSSSMCHLFCCHSRDLNLFLWRMDYVGIVVMIITSFFPQIYYVFLCEPHWQIIYLAGITAMGLFTIATMLSPTLSTSKYRAFRAMLFCSMGLFGIVPAIHACFVNWSNPRRNITLAYEIGMALSYLTGTLFYVTRIPERWKPGWFDLAGHSHQIFHALVVVGALAHYAATLQMLEWRDSFGCDTVL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0929 367 Pfam Haemolysin-III related 80 348 IPR004254 GO:0016021
Gso17g0929 367 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 23 364 IPR004254 GO:0016021
Gso17g0929 367 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 1 23 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0929 Gso-Chr17 8633133 8636094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0929 K07297 - gmx:100799310 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0929 17 8633133 8636094 Gso17g0929 17 8633133 8636094 ECH
Gso17g0929 17 8633133 8636094 Gso6g1886 6 27667860 27671313 PCT
Gso6g1886 6 27667860 27671313 Gso17g0929 17 8633133 8636094 PCT