Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1808 ATGGATGACCACCGAAACTCAACAACAAAAAACGCCATTGGCCTCTGCCTCCTCCCACAAGAACTCATCCAAAACATCTTCCTCTCCCTCGTACTCCCCGAAATCATTCGCTTAAAACTCCTAAACAAATCCTTCTCCAGAATAATCTCCGACAACACCTTCGTTCGCCAGTACAACAGTTTATCCACCTCCACCACGTGGCTCTTCGTCTACAAAAAACGGTGGCTCCGCGACGCCGCTCTCCACTCCTTCACCGACCGGAGCTCCGACCGCTGGTTCCGCATCCCCATATCGGAGCTTCTCAAACCAATCCAATTCCACGGCGAGGACCTCTACTTCCTCGCCGCTTCAAACAACGTCTTCCTCTTCGCCTCCAACACCGTTCGCGAAGTCGTCGCCGTTAACCTAATCTCCGTCACCGTTAAGAAGATCCCTCCCTCTCCGTTAGGTCCACGTGGCACCTCTTCCTGGAGACGCTCCGGGATGAAGCTCGTCACCGACCCAACCGGTTCGGGCCATTTCCGCTTCATGTTCGCTGAGTTCGTTGACAACCGCCCCGTGTTGTTCGTGTACGAGTCCAGAACCGACACGTGGAGGTCAACGGAGGCTGAGGAAAATACTAATACTAATGAGTTTTCGTTTTCGTTTTCGCCACGTGGCGCGGGTCACGTGTTTCTCAACGTGGTTCACGGGCCTATGGAGAGCGTTCTGGTCGCGACGATGCCAGATGAGTGCGATAAGTCCGTAGTTCTACGGCCGAGATTCAACGTGGCTGGGGCTAATGACGATCTGACGGTTGGATTTAGTTGGGGGAACGTGATGGACATGTTACACGTGTACGGTGATGGGTACATGATGGTTGTGAAATCGGAGGGTGGGAACACGAGGAACGTGAGGGTGTTGAAGAGGGTGGAGCTTTGGGGTTTGAGTTTAGACGGAAGAAAGTGGGAGTTTGTGTCTGCGGTTCCTGGTGTGATTGAGAAGCCTTATGCAGCAATGATGGGTTGCTTAGAAGAGAAAAACGGTGTCGTTAGGGCTGCGTTGGTGTCTAATTGTGAAGGTGTTTGGGACATGACGTGGCTCTCTTTTGATACAAAGTGGAACCGGTGGACGTGGATGCCTCTCCCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGTATAAGCTTCTCCTCTGGACTCACCTTGCCATGA 1194 0.5251 MDDHRNSTTKNAIGLCLLPQELIQNIFLSLVLPEIIRLKLLNKSFSRIISDNTFVRQYNSLSTSTTWLFVYKKRWLRDAALHSFTDRSSDRWFRIPISELLKPIQFHGEDLYFLAASNNVFLFASNTVREVVAVNLISVTVKKIPPSPLGPRGTSSWRRSGMKLVTDPTGSGHFRFMFAEFVDNRPVLFVYESRTDTWRSTEAEENTNTNEFSFSFSPRGAGHVFLNVVHGPMESVLVATMPDECDKSVVLRPRFNVAGANDDLTVGFSWGNVMDMLHVYGDGYMMVVKSEGGNTRNVRVLKRVELWGLSLDGRKWEFVSAVPGVIEKPYAAMMGCLEEKNGVVRAALVSNCEGVWDMTWLSFDTKWNRWTWMPLPDCKMKGWNMAGISFSSGLTLP* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1808 397 SUPERFAMILY F-box domain 6 75 IPR036047 GO:0005515
Gso6g1808 397 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Gso6g1808 397 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR FAMILY PROTEIN 1 396 - -
Gso6g1808 397 PANTHER F-BOX/KELCH-REPEAT PROTEIN 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1808 Gso-Chr6 21575556 21577145 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1808 - - gmx:100815083 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1253 4 31801189 31802376 Gso6g1808 6 21575556 21577145 GST