Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1253 ATGGACGACCACCGAAACTCAACACCAAAAAACGCCATTGGCCTCTGCCTCCTCCCACAGGAACTCATCCAAAACATCTTCCTCTCCCTCGTACTCCCCGAAATCATTCGTTTAAAACTCGTCAACAAGTCCTTCTCGCGAATAATCTCCGACCACGCCTTCGTTCGCCAGTGCAACAATTTCTCCACCTCCACTACGTGGCTCTTCGTCTACAAAAAACGCTGGCTCCGCGACGCCGTGCTCCACGCCTTCACCGACCGGAGCTCCGACCGATGGTTCCGCATCCCCATATCAGAGCTTCTCAAACCGATCCACTTTCACGGCGAGGACCTCTACTTCCTCGCCGCCTCCAACAACGTCTTCCTCTTCGCCTCCAACACCGTCCTCGAAGTCGTCGCCGTTAACCTAATCACCGTCACCGTTAAGAAGATCCCCCCTTCCCCGTTGGGTCCACGTGGCACCTCCTCGTGGAGACGCTCCGGGATGAAGCTCGTCACCGACTCCTCCGGTTCGGGCCAGTTTCGTTTCATGTTCGCTGAGTTCGTTGACAACCGCCCCGTCTTGTTCGCGTACGAGTCCGAAACCGACACGTGGAAGTCAACGGAGGCAGAGGAAGATAATAACAAAGAGTTTTCATTTTCGTTTTCGCCACGTGGCGCGAGTCACGTGTTTCTCAACGTTGTTCACGGGCCTATGGAGAGCGTTCTGGTCGCGGCGACGCCAGAGTGCGACAAGCCCGTAGTTCTACGGCCCAGATTCAACGTGACTGAGGCTAATGATGATCTGACGGTTGGATTTAGTTGGGGGAACGTGATGGACATGTTACACGTGTACGGCGATGGGTACATGATGATTGTGAAATCGGAGGGTGGGAACACGAGGAACGTGAGGGTGTTGAAGGGAGTGGAGCTTTGGGGTTTGAGTTTGAACGGGAGAAAGTGGGAGTTTGTGTCTGCGGTTCCTGGTGTGATTGAGAAGCCTTACGCGGCAATGATGGGTTGCTTAGAGGAGAAAAACGGTGTCGTTAGGGCTGCGTTGGTTTCTAATTGTGAGGGAGTTTGGGACATGACGTGGCTCTCTTTTGATACCAGGTGGAACCGGTGGACGTTTATGCCCCTCCCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGTATAAGCTTCTCCTCTGGACTTACCTTGCCATGA 1188 0.5379 MDDHRNSTPKNAIGLCLLPQELIQNIFLSLVLPEIIRLKLVNKSFSRIISDHAFVRQCNNFSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPISELLKPIHFHGEDLYFLAASNNVFLFASNTVLEVVAVNLITVTVKKIPPSPLGPRGTSSWRRSGMKLVTDSSGSGQFRFMFAEFVDNRPVLFAYESETDTWKSTEAEEDNNKEFSFSFSPRGASHVFLNVVHGPMESVLVAATPECDKPVVLRPRFNVTEANDDLTVGFSWGNVMDMLHVYGDGYMMIVKSEGGNTRNVRVLKGVELWGLSLNGRKWEFVSAVPGVIEKPYAAMMGCLEEKNGVVRAALVSNCEGVWDMTWLSFDTRWNRWTFMPLPDCKMKGWNMAGISFSSGLTLP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1253 395 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Gso4g1253 395 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR FAMILY PROTEIN 1 394 - -
Gso4g1253 395 SMART fbox_2 18 58 IPR001810 GO:0005515
Gso4g1253 395 PANTHER F-BOX/KELCH-REPEAT PROTEIN 1 394 - -
Gso4g1253 395 Pfam F-box domain 17 53 IPR001810 GO:0005515
Gso4g1253 395 SUPERFAMILY F-box domain 15 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1253 Gso-Chr4 31801189 31802376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1253 - - gmx:100805433 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1253 4 31801189 31802376 Gso6g1808 6 21575556 21577145 GST