Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1730 ATGGATGTTGTAAATGATTTGCATATGGGGCCTCCAGCAACAACCAATTTGGGAGGTTCCACTAGTACAGATGATGTAAATTCATCGCAGAAGCAGAAAATAGTGAGAAAGAAGACACAAGGTAAATCTGTTGAGTGTGAAGGTCCTGATTTTTCACTGGATAAGTCTTCACCGAAGACAGATGCTACTATAAAGCACCCATTACATGAGTCCCCTGCTTTACCTAATTTCTTAAGTTGCCAAATAATTGTAGAATATTCAACAGAGAATGAAAAGAGCAAACGGCAGAAGACAACACATAATGCTATTGAAGGCAATGTTAATGGTTGCGGCACTCCTGAGGGTATTTTTTCACCAAAAGCTTCCACACCTGCATTGGATATGCCTTCAGAACATCCCATTCAATGTTTTTCCAATGATCTAATAACAAGTCAATCTTGTGTGGAAGTGGGTATTTGTCAGGGACATAATGAAGAAAAGAAGCAAAATATGATCAATACAACTGCAGAAAATAGCAATTCACAGCAAGGCATTCCAGAAGAAAGCTGCAATCACATTTCAGTTGCAGCAAGTCATGAGCCTTTTGCAAAAGAGTGTGTTTCAGAAGTTGTAAAATTGAACACAGAGCATGGTATAAATGATAACATTCCCAACCGTGAGGATAAGAATGATTTTGAAAAGAATACAAGTCTGGTGAAGAAAAATGTTGATGACTCACTGGATTATGGCTTGTGTGATAAAAATCTGTGTGTTAAAACGTATGCAAGGAGAAAAATGGTTAATTCCAGTTGCTGGAGAAACAGTGGTTCCCCAAGTCCTGAAAATTGTAACAAGGAACCAACTATTCAGGATCATCAAAAGGATGATTCACACAAATTTTCTGATGGACCATTGAGAGTGTGCTTGATGGATGGAGAAACAAAACTTTCAATTGATCAAGTTACCTCACAAAGTGGAGCTGCAGCTGAGGAAATAAAGTTGAGCACTGACAACATTAACGAGCAAAGATTTATGACTACATCTTCTGCAGTAGACATTCCTTCAGAGCATCTCAAAACAGATGGCAGACCACTAGATCATACTAAGATTACAAGAAATGATCTGTGTTGTGCAGATGAGGAAATAGAGTTGAGCACTGACAACATTAAGGAGCAAAGATTTATGGCTACCTCTTCTGCTGTAGACATTCCTGTTGAGCAACTCAAAACAAGTTGTAGAAAGCTAGATAATACGGAGATTACAAGAAATGATCTGTGTTGTGCAGACAGAAATTTTGCTGGCAACCAAAAGAACAAACTTCTCATCCTTGATCTGAATGGACTGCTTGCTGATTTTGTCAGTATCAGTGACACTGACACTCCTTTCCGAAGATATAGACGAGAACCAGAGCCAGATTTTGTGCTTAGAGGGAAGAAAGTCTACAAGAGGCCCTTTTGTGACGATTTTCTACAGTTTTGCTTTGACACATTTCATGTGGGAGTATGGTCGTCTAGATCCAAGAGCAATGTTGATGCATCAATCAAATTTCTTATGGGGAAATCTGCAACCAAACTGCTCTTTTGTTGGAATCAGTCCCACTGTACTAAAACAAAGTTTAGTACTGTTGAGAATATAGACAAGCCACTTGTGTTGAAGGAAATAAGGAAGTTGTGGGAAAAGGCAGAACCTGATCTACCATGGGAGAAGGGAGAGTTTAATGAGTCAAACACATTGTTATTGGATGACTCGCCTTACAAGGCACTAATGAATCCTAGGCATTCAGCAATATTTCCTTATTCTTACCGGTACTACCACACCAGAGACTCAGAATTAGGACGAGAAGGTGATCTTCGGGTTTATCTAAAAGGGCTGGCTAAGGCCGAGAATGTGCAAAACTATGTGTCAGAAAATCCGTTTGGCCAACGGCCCATAAGAGAAGCAAATCCATCTTGGGGTTACTATCGTAGAGTTATAGAATCACTTCAAAGAAGCCAAAATGATGGGCCCTCATTACCCAGGTAG 2001 0.3963 MDVVNDLHMGPPATTNLGGSTSTDDVNSSQKQKIVRKKTQGKSVECEGPDFSLDKSSPKTDATIKHPLHESPALPNFLSCQIIVEYSTENEKSKRQKTTHNAIEGNVNGCGTPEGIFSPKASTPALDMPSEHPIQCFSNDLITSQSCVEVGICQGHNEEKKQNMINTTAENSNSQQGIPEESCNHISVAASHEPFAKECVSEVVKLNTEHGINDNIPNREDKNDFEKNTSLVKKNVDDSLDYGLCDKNLCVKTYARRKMVNSSCWRNSGSPSPENCNKEPTIQDHQKDDSHKFSDGPLRVCLMDGETKLSIDQVTSQSGAAAEEIKLSTDNINEQRFMTTSSAVDIPSEHLKTDGRPLDHTKITRNDLCCADEEIELSTDNIKEQRFMATSSAVDIPVEQLKTSCRKLDNTEITRNDLCCADRNFAGNQKNKLLILDLNGLLADFVSISDTDTPFRRYRREPEPDFVLRGKKVYKRPFCDDFLQFCFDTFHVGVWSSRSKSNVDASIKFLMGKSATKLLFCWNQSHCTKTKFSTVENIDKPLVLKEIRKLWEKAEPDLPWEKGEFNESNTLLLDDSPYKALMNPRHSAIFPYSYRYYHTRDSELGREGDLRVYLKGLAKAENVQNYVSENPFGQRPIREANPSWGYYRRVIESLQRSQNDGPSLPR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1730 666 MobiDBLite consensus disorder prediction 14 29 - -
Gso6g1730 666 MobiDBLite consensus disorder prediction 264 294 - -
Gso6g1730 666 SMART forpap2 430 601 IPR004274 -
Gso6g1730 666 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 36 660 - -
Gso6g1730 666 MobiDBLite consensus disorder prediction 38 61 - -
Gso6g1730 666 MobiDBLite consensus disorder prediction 264 279 - -
Gso6g1730 666 ProSiteProfiles FCP1 homology domain profile. 427 617 IPR004274 -
Gso6g1730 666 MobiDBLite consensus disorder prediction 280 294 - -
Gso6g1730 666 Gene3D - 383 632 IPR023214 -
Gso6g1730 666 SUPERFAMILY HAD-like 429 626 IPR036412 -
Gso6g1730 666 MobiDBLite consensus disorder prediction 1 61 - -
Gso6g1730 666 Pfam NLI interacting factor-like phosphatase 432 624 IPR004274 -
Gso6g1730 666 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 36 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1730 Gso-Chr6 19205361 19210343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1730 - - gmx:100806707 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1730 6 19205361 19210343 Gso6g1730 6 19205361 19210343 ECH
Gso4g1350 4 39201677 39205577 Gso6g1730 6 19205361 19210343 GST