Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1350 ATGGATGTTGTAAATGATTTGCATATGGGGCCTCCAGCAACAACCAATATGGGAGGTTCCACTAGTACAGAGGATGTAAATTCATCACAGAAGCAGAAAATGGCGAGAAAGAAGAAACAAGCTGTTGAGTGTGAAGGTGTTGATTTTTCACTGGATAAGTCTTTACCGAAGACGGATGCTACTATAAAGCACCCATTACATGGGTCCCCAGCTTTACCTAATTTCTTAAGTTGCCAAATATTTGTAGAATATTCAACAAATAATGAAAAGAGCAAACGGCAGAAGACAACACATAATGCTATTGAAGACAATGTTAATGGTTGCGGCACTCCAGAGTATATTTTTTCACCAAAAGCTTCCACACCTGCATTGGATATGCCTTCAGAACATCCCATTCAATGTTTTTCTAGTGATCCAATAACTAGTCAATCTTGTGTGGAAGTGGGTATTTGTCAGGGACATAATGAAGAAAATGAGCAAAATATGATCAATACAACTGCAGAAAATAGCAATTCACAGCATGGCATTCCAGAAGAAAGCTGCAATCACATTTCAGTTGCAGCAAGTCCTGAGCCTTTTGTGAAAGAGTGTGTGTCAGAAGTTGTAAAATTGAACACAGAGCATGGTATAAATGATAACATTCCCAACCCTGAGGATAAGAATGGTTTATTAATGAATACAAGTCTGGTGAAGAAAAATGTTGATGACTCACCGGATTATGGCTTGTCTGATAAAAATCTGTGTTATATAACCTATGCAAGGAGAAAAATGGTTAATTCCAGTTGCAGAAGAAACAGTGGTTCCCCAAGTCCTGAAAATGGTAACAAGGAACCAACTATTCAGGATCATCAAAAGGATGATTCACACGAATCTTCTGATGGACCATTGAGAGTTTGCTTGATGGATGGAGAAACAAAACTTTCAATTGATCAAGTTACCTCACAAAGTGGAGCTGCTGCTGAGGAAATAAAGTTGAGTGCTGACAACATTAATGAGCAAAGATTTATGACTACATCTTCTGCAGTAGACATTCCTTCGGAGCATCTTGAAACAGATGGTAGACAGCTAGATCATACTGGGATTACAAGAAATTATCTGTATTGTGCAGATGAGGAAATAGAGTTGAACACTGACAACATTAAGGAGCAAAGATTTATGACTACCTCTTCTGCAGTAGACATTCCTTCGGAGCATCTTGAAACAGATGGTAGACAGCTAGATCATACTGGGATTACAAGAAATGATCTGTATTGTGCAGATGAGGAAATAGAGTTGAACACTGACAACATTAAGGAGCAAAGATTTATGACTACCTCTTCTGCAGTAGACATTCCTTTTGAGCAACTCGAAACAAATTGTAGAAAGCTAGATAATACAGAGATTACAAGAAATGATCTGTGTTGTGCAGGTGATGTTTCTGATTTAAGCTTAGACACAGTAAGAGACGGTCATTTAAAGATTTCACAATTCTCACTAGACAGAAATTTTGCCGACAAACAAAAGAATAAGCTTCTCATCCTTGATTTGAATGGACTGCTTGCTGATTTTGTCAGTATCAGTGACACTCCTTTCCGAATATATAGACGAGAACCAGAGCCAGATTTTGTGCTTAGAGGGAAGAAAGTATACAAGAGGCCCTATTGTGACGATTTTCTACAGTTTTGCTTTGACACATTTCATGTGGGAGTATGGTCATCTAGATCCAAGAGCAATGTCAATGAAGCTATCAAATTTCTTATGGGGAAATCTGCGTCCAAGCTGCTCTTTTGTTGGAATCAGTCCCACTGTACTGAAACAAAGTTCACTACTGTTGAGAATATAGAGAAGCCCCTTGTGTTGAAGGAAATAACAAAGTTGTGGGAAAAGGAAGAACCTGATCTACCATGGGAGAAGGGAGAGTTTAATGAGTCAAACACATTATTATTGGATGACTCCCCTTACAAGGCACTAATGAATCCTAGGCATTCTGCAATATTTCCTTATTCTTACCGGTACTACCACACCAGAGACTCGGAATTAGGACCAGGAGGTGATCTTCGAGTTTATCTAAAAGGGCTGGCTAAGGCCGAGAATGTGCAAAACTACGTGTCAGAAAATCCGTTTGGCCAACGGCCCATAAGAGAAGCAAATCCATCTTGGGTTTACTATCGTAGAGTTATAGAGTCACTTAAAAGAAGCCAAAATGCAGGGTCCTCATTACCACTCTGA 2208 0.3913 MDVVNDLHMGPPATTNMGGSTSTEDVNSSQKQKMARKKKQAVECEGVDFSLDKSLPKTDATIKHPLHGSPALPNFLSCQIFVEYSTNNEKSKRQKTTHNAIEDNVNGCGTPEYIFSPKASTPALDMPSEHPIQCFSSDPITSQSCVEVGICQGHNEENEQNMINTTAENSNSQHGIPEESCNHISVAASPEPFVKECVSEVVKLNTEHGINDNIPNPEDKNGLLMNTSLVKKNVDDSPDYGLSDKNLCYITYARRKMVNSSCRRNSGSPSPENGNKEPTIQDHQKDDSHESSDGPLRVCLMDGETKLSIDQVTSQSGAAAEEIKLSADNINEQRFMTTSSAVDIPSEHLETDGRQLDHTGITRNYLYCADEEIELNTDNIKEQRFMTTSSAVDIPSEHLETDGRQLDHTGITRNDLYCADEEIELNTDNIKEQRFMTTSSAVDIPFEQLETNCRKLDNTEITRNDLCCAGDVSDLSLDTVRDGHLKISQFSLDRNFADKQKNKLLILDLNGLLADFVSISDTPFRIYRREPEPDFVLRGKKVYKRPYCDDFLQFCFDTFHVGVWSSRSKSNVNEAIKFLMGKSASKLLFCWNQSHCTETKFTTVENIEKPLVLKEITKLWEKEEPDLPWEKGEFNESNTLLLDDSPYKALMNPRHSAIFPYSYRYYHTRDSELGPGGDLRVYLKGLAKAENVQNYVSENPFGQRPIREANPSWVYYRRVIESLKRSQNAGSSLPL* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1350 735 MobiDBLite consensus disorder prediction 14 29 - -
Gso4g1350 735 MobiDBLite consensus disorder prediction 259 296 - -
Gso4g1350 735 ProSiteProfiles FCP1 homology domain profile. 498 686 IPR004274 -
Gso4g1350 735 Gene3D - 478 701 IPR023214 -
Gso4g1350 735 Pfam NLI interacting factor-like phosphatase 503 693 IPR004274 -
Gso4g1350 735 MobiDBLite consensus disorder prediction 259 277 - -
Gso4g1350 735 SUPERFAMILY HAD-like 500 695 IPR036412 -
Gso4g1350 735 SMART forpap2 501 670 IPR004274 -
Gso4g1350 735 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 26 728 - -
Gso4g1350 735 MobiDBLite consensus disorder prediction 278 293 - -
Gso4g1350 735 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 26 728 - -
Gso4g1350 735 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1350 Gso-Chr4 39201677 39205577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1350 - - gsj:114409658 1487.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1350 4 39201677 39205577 Gso6g1730 6 19205361 19210343 GST