Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1638 ATGAAGTTCCATTTGGTGCTATTTGTTATAATAGCCGCCATTTTTGGAGTTGGGCTTGAAGGGTGCCAATGCAAGGTTGTGCAGTTCATTTTTGGAGACTCTCTCTCTGATGTTGGAAATAACAATTACCTTTCTAAGAGCCTTGCTCAGGCAAGTTTACCTTGGTATGGTATTGATTTGGGCAATGGACTCCCTAATGGCAGGTTCTCAAATGGTCGCACGGTTGCTGGTATAATAGGTGATAATATGGGCCTTCCTAGGCCTCCAGCATTCCTTGACCCATCTTTATCTGAAGATGTTATATTGGAAAATGGAGTGAATTATGCTTCTGGGGGTGGAGGCATCTTGAATGAAACAGGCAGTTATTTTATTCAAAGGTTTTCTCTCTACAAGCAAATGGAGCTGTTTCAGGGGACACAAGAACTGATTAGAAGCAGAATTGGGAAAGAGGAGGCAGAGAAGTTTTTCCAGGGAGCTCATTATGTTGTTGCTTTAGGCAGCAATGACTTCATCAACAACTACTTGATGCCTGTTTACAGTGATTCATGGACATATAATGATCAAACCTTCATGGATTACTTGATAGGAACTCTAGGAGAACAATTAAAGCTACTGCATGGTCTAGGAGCAAGGCAGTTGATGGTGTTTGGGCTGGGCCCAATGGGCTGCATTCCACTTCAAAGGGTGCTTAGTACATCTGGGGAATGTCAAAGTAGAACAAATAATCTGGCTATTAGCTTTAATAAGGCTACAAACAAGTTACTTGTTGACTTGGGAAAGCAACTTCCCAATTCAAGCTACAGATTTGGAGATGCATATGACGTTGTTAATGATGTGATTACCAACCCGAACAAATATGGGTTCCAAAACTCTGATTCACCCTGTTGCTCCTTTGGGAATATTCGGCCAGCTCTTACATGTATACCTGCATCAAAACTGTGCAAAGATAGAAGCAAGTACGTTTTTTGGGATGAGTACCATCCTTCAGACAGAGCTAATGAGCTAATTGCCAATGAACTCATCAAGAAATTTGGGTTTGTGCGTGTTGATCAAACAAAACCTCCTTCACCATCACCCGCTCTTGCTCCATCTTCAGACGATTAA 1104 0.4185 MKFHLVLFVIIAAIFGVGLEGCQCKVVQFIFGDSLSDVGNNNYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVAGIIGDNMGLPRPPAFLDPSLSEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQMELFQGTQELIRSRIGKEEAEKFFQGAHYVVALGSNDFINNYLMPVYSDSWTYNDQTFMDYLIGTLGEQLKLLHGLGARQLMVFGLGPMGCIPLQRVLSTSGECQSRTNNLAISFNKATNKLLVDLGKQLPNSSYRFGDAYDVVNDVITNPNKYGFQNSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELIANELIKKFGFVRVDQTKPPSPSPALAPSSDD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1638 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 357 - -
Gso6g1638 367 SUPERFAMILY SGNH hydrolase 29 343 - -
Gso6g1638 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Gso6g1638 367 Gene3D SGNH hydrolase 27 344 IPR036514 -
Gso6g1638 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 357 - -
Gso6g1638 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1638 Gso-Chr6 17350539 17354762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1638 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 33.016 3.95e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1638 - - gmx:100796950 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1638 6 17350539 17354762 Gso6g1638 6 17350539 17354762 ECH
Gso4g1414 4 41625152 41630588 Gso6g1638 6 17350539 17354762 GST