Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1414 ATGAAGTTCCATTTGGTGCTAGTTGTTCTAATAGGCACCATATTTGGAATTGGGCTTGAAGGGTGCCAATGCAAGGTTGTGCAGTTCATTTTTGGAGACTCCCTCTCGGATGTTGGAAATAACAAGTACCTCTCTAAGAGCCTTGCTCAGGCAAGTTTACCTTGGTATGGTATTGATTTGGGTAATGGTCTACCTAATGGTAGGTTCTCAAATGGTCGCACGGTTGCTGATATAATAGGTGACAATATGGGCCTTCCGAGGCCTCCAGCATTCCTTGATCCTTCTCTATCTGAAGATGTTATATTGGAAAATGGAGTGAATTATGCTTCTGGGGGTGGAGGCATCTTGAATGAAACTGGCAGTTATTTTATTCAAAGGTTTTCTCTCTACAAGCAAATTGAGCTGTTTCAGGGGACACAAGAACTGATTAGAAGCAGAATTGGGAAAGAGGAGGCAGAAACGTTTTTCCAGGAAGCTCATTATGTTGTTGCTTTAGGCAGCAATGACTTCATCAACAACTACTTGATGCCTGTTTACAGTGATTCGTGGACATATAACGATCAAACCTTCATAGACTACTTGATAGGAACTCTACGAGAACAATTGAAGCTACTGCATGGTCTAGGAGCAAGGCAGTTGATGGTGTTTGGGCTGGGCCCAATGGGATGCATTCCACTTCAAAGGGTGCTTAGTACATCTGGGGAATGTCAAGATAGAACAAACAATCTTGCTATTAGCTTTAATAAGGCTACAACCAAGTTAGTAGTTGACTTGGGAAAGCAACTTCCCAATTCAAGCTATAGATTTGGAGATGCATATGACGTTGTTAATGATGTGATTAGCAACCCGAATAAATATGGGTTTCAAAACTCAGACTCACCCTGTTGCTCCTTTGGAAATATTCGACCGGCTCTTACATGTATACCTGCATCAAAACTGTGCAAAGATAGAAGCAAGTACGTTTTTTGGGACGAGTATCATCCCTCAGACAGAGCTAATGAGCTAATTGCCAATGAGCTCATCAAGAAATTTGGGTTTGTGCGTGTTGATCAAACAACACCTCCTTCACCATCACCCGCTCTTGCTCCATCTTCAGACGATTAA 1104 0.4212 MKFHLVLVVLIGTIFGIGLEGCQCKVVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLSEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSRIGKEEAETFFQEAHYVVALGSNDFINNYLMPVYSDSWTYNDQTFIDYLIGTLREQLKLLHGLGARQLMVFGLGPMGCIPLQRVLSTSGECQDRTNNLAISFNKATTKLVVDLGKQLPNSSYRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELIANELIKKFGFVRVDQTTPPSPSPALAPSSDD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1414 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Gso4g1414 367 SUPERFAMILY SGNH hydrolase 107 343 - -
Gso4g1414 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 357 - -
Gso4g1414 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Gso4g1414 367 Gene3D SGNH hydrolase 27 344 IPR036514 -
Gso4g1414 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1414 Gso-Chr4 41625152 41630588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1414 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 33.651 6.48e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1414 - - gmx:100803991 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1414 4 41625152 41630588 Gso6g1638 6 17350539 17354762 GST