Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1634 ATGGGGGAGCACGTGGTTTTATCTGTTCTTGACTCTCTTATAGCACCTGCAACTTTGCAACCACAACATGATGGTGATGGTGATGCTTTAGGTTCACTCATTGAGGGTGCTACTCATGTTAATGATGTTGGGGAATGTGATACACTTGAAGAAGAAGAAGAAGAAGAAGAAGATAAAGAAGAAGAAGACCTTATCAAAATGGTGGAATGTCGCATTTGCCAGGAGGATGATACCCTTCAAAATTTGGACATACCCTGTGCTTGCAGTGGAACTTTGAAGTTTGCTCATACGAAATGTGTTCAAATATGGTGCTACGAGAAGGGTGATACAATTTGTGAGATCTGCAATCAGCCATTCAAACCTGGTTATACTGCAAATTCACCTGTCTGCCATCCTGGAGATACTTCAATTGATATCAGTGATGACTGGGCAACCACTAGGAATCCTTTAGATTTGCACAATGCTCGACTTTTGGCTATTGCAGCTGTGGACTACCAAGTTCCAGAGACTGAGCACGAAGATTATGTCAATGCTGGCACTGGTGGAACCACATTGTGGCACTCTGTTGGTCTAATTTTAATGGCTCTTTTACTTCTGAGGCATGCTGCTCCCCTCTTCAATGCTGATGTGGAGAAAGCTATAGCATATTTTTATTTTTTCTTTCTTGGCGCGGCTGCTGTTATCCTTCCATGCTATCTTGTGGCCTGGATAATTCGCATAATACAGCATCAAAGCAATCAGCTGAAGAACTTGCATTTATGCTACAGGCAGAGGAACAATAAGGTTAGCAGTTTGCAGTATCACCAGGACCTGTTTTTCACTGATTAA 828 0.4227 MGEHVVLSVLDSLIAPATLQPQHDGDGDALGSLIEGATHVNDVGECDTLEEEEEEEEDKEEEDLIKMVECRICQEDDTLQNLDIPCACSGTLKFAHTKCVQIWCYEKGDTICEICNQPFKPGYTANSPVCHPGDTSIDISDDWATTRNPLDLHNARLLAIAAVDYQVPETEHEDYVNAGTGGTTLWHSVGLILMALLLLRHAAPLFNADVEKAIAYFYFFFLGAAAVILPCYLVAWIIRIIQHQSNQLKNLHLCYRQRNNKVSSLQYHQDLFFTD* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1634 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 121 IPR013083 -
Gso6g1634 275 SUPERFAMILY RING/U-box 68 120 - -
Gso6g1634 275 Pfam RING-variant domain 70 115 IPR011016 GO:0008270
Gso6g1634 275 ProSiteProfiles Zinc finger RING-CH-type profile. 62 122 IPR011016 GO:0008270
Gso6g1634 275 PANTHER OS11G0600700 PROTEIN 1 256 - -
Gso6g1634 275 SMART ringv_2 69 116 IPR011016 GO:0008270
Gso6g1634 275 Pfam Protein of unknown function (DUF3675) 121 238 IPR022143 -
Gso6g1634 275 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 256 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1634 Gso-Chr6 17309449 17313687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1634 - - gmx:100795900 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1634 6 17309449 17313687 Gso6g1634 6 17309449 17313687 ECH
Gso4g1417 4 41748194 41752279 Gso6g1634 6 17309449 17313687 GST