Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1618 ATGTTTTTGTCAAGAACACTTGGACGAACACTCTTTGCTGCTGCTGCCAGATCAAAACAATATGCCACTACAGCAGCTGCTGCTAGCAGAGAAGGACACAACCCCCTTCAGGAGTTTTTTGAGGCAGACAGGAGCCCTGAAGATGACAAACCTGTTGTTTATGGTCGGAGTTGGAAGGCGTGTGAACTGCGTCTGAAGTCTTGGGATGACCTTCATAAGTTGTGGTATGTGTTGTTAAAGGAAAAGAACATGTTGATGACTCAACGTCAAATGCTTAATGCACAGAACCTGCGTTTTCCTAACCCAGAGCGCATCCCTAAGGTGAGGAAGTCAATGTGTCGCATCAAGCATGTACTTACTGAGAGAGCAATTGAAGAACCAGATCCGAGGAGGTCTGCTGAGATGAAGAGAATGATAAATGCTCTTTGA 429 0.4545 MFLSRTLGRTLFAAAARSKQYATTAAAASREGHNPLQEFFEADRSPEDDKPVVYGRSWKACELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1618 142 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 36 122 IPR010729 GO:0003735|GO:0005761|GO:0006412
Gso6g1618 142 Gene3D - 30 132 IPR038340 -
Gso6g1618 142 SUPERFAMILY Ribosomal protein L29 (L29p) 58 125 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gso6g1618 142 TIGRFAM L29: ribosomal protein uL29 62 122 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gso6g1618 142 PANTHER RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED 1 142 IPR010729 GO:0003735|GO:0005761|GO:0006412
Gso6g1618 142 CDD Ribosomal_L29_HIP 62 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1618 Gso-Chr6 17018849 17021503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1618 K17428 - gmx:100500208 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1436 4 42248051 42250744 Gso6g1618 6 17018849 17021503 GST