Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1436 ATGTTTTTGTCAAGAACACTTGGACGAACACTATTTGCTGCAGCTGCCAGATCAAAACAATATGCCACTACAGCAGCTGCTGCTGCTGGCAGAGAAGGACACAACCCCCTTCAGGAGTTCTTTGAGGCAGACAGGAGCCCTGATGATGACAAACCTGTTGTTTATGGTCGGAGTTGGAAGGCGTCTGAACTGCGTCTGAAGTCTTGGGACGACCTTCATAAGTTGTGGTATGTGTTGTTAAAGGAAAAGAACATGTTGATGACTCAACGTCAAATGCTTAATGCACAGAACCTGCGTTTTCCTAACCCGGAGCGCATCCCTAAGGTGAGGAAGTCAATGTGTCGCATCAAGCATGTACTTACTGAGAGAGCAATTGAAGAACCAGATCCCAGGAGGTCTGCTGAGATGAAAAGAATGATAAATGCTCTTTGA 432 0.4606 MFLSRTLGRTLFAAAARSKQYATTAAAAAGREGHNPLQEFFEADRSPDDDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1436 143 Coils Coil 133 143 - -
Gso4g1436 143 CDD Ribosomal_L29_HIP 62 123 - -
Gso4g1436 143 Gene3D - 31 133 IPR038340 -
Gso4g1436 143 PANTHER RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED 1 143 IPR010729 GO:0003735|GO:0005761|GO:0006412
Gso4g1436 143 TIGRFAM L29: ribosomal protein uL29 63 123 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gso4g1436 143 SUPERFAMILY Ribosomal protein L29 (L29p) 59 126 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gso4g1436 143 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 37 123 IPR010729 GO:0003735|GO:0005761|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1436 Gso-Chr4 42248051 42250744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1436 K17428 - gmx:100812176 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1436 4 42248051 42250744 Gso6g1618 6 17018849 17021503 GST