Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1581 ATGCGAGCACAGACGGTGATGACACAGTGGTGCACAAGAGCAGCAGCGTGTGGGCAATTGAGGATGAGCACTAACACTAACACTCCCAAACACGACGATATCGACGCCATTTTCAAACAAAAGCGCTTACTTCGAACGCAGGTCAGAAAAACCCTCAAGTCCATCGATCCCTCCCTCAAATCCCACCAAGATAACACCGTTCAAGACATAGTTTTGGGAGCTCCGTGGTTCAGATCCAGTCGCAGGTTGTGCGCGTACATAAGCTGCGCTGCTCTTCGCGAAGTCGACACTTCAAAAATCTTGTCACAGATTTTGCAACATAATAGTACTACTGATGGAAAAAAACTTTATGTGCCACGCGTGGAGGATAAGAATAGTCACATGCGTATGCTTCACATATCGCGAATTGATGATCTCATTGCAAACTCAATGGACATACTAGAGCCTACTCCGGTTGATGCTGATGGAAATGCGCGTGAAGATGTTATGCAGGCAAATGATCCAGTTGATTTGTTCCTTTTACCTGGACTGGCATTTGACAGATCTGGAAGACGTTTAGGTCGTGGTGGAGGTTACTATGATACCTTCCTGAAGAATTACCAAGACCTTGCAAAGACGCGTAATTGGAAGCAACCCTTGCTTGTTGCACTGTCATATTCTGAACAAATACTGGATGAAGGAGTAATACCAATGACTTCATCTGATCTTCCAGTTGATGCTCTGGTATCTCCAGAAGGTGTGATTCCCATCAGTACAACTGCCTTAAACAGCATGGATCTCTGA 783 0.4534 MRAQTVMTQWCTRAAACGQLRMSTNTNTPKHDDIDAIFKQKRLLRTQVRKTLKSIDPSLKSHQDNTVQDIVLGAPWFRSSRRLCAYISCAALREVDTSKILSQILQHNSTTDGKKLYVPRVEDKNSHMRMLHISRIDDLIANSMDILEPTPVDADGNAREDVMQANDPVDLFLLPGLAFDRSGRRLGRGGGYYDTFLKNYQDLAKTRNWKQPLLVALSYSEQILDEGVIPMTSSDLPVDALVSPEGVIPISTTALNSMDL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1581 260 SUPERFAMILY NagB/RpiA/CoA transferase-like 40 250 IPR037171 -
Gso6g1581 260 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE, MITOCHONDRIAL-LIKE ISOFORM X1 19 259 - -
Gso6g1581 260 TIGRFAM MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 41 243 IPR002698 -
Gso6g1581 260 Pfam 5-formyltetrahydrofolate cyclo-ligase family 41 244 IPR002698 -
Gso6g1581 260 Gene3D - 33 247 IPR024185 -
Gso6g1581 260 PANTHER ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE 19 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1581 Gso-Chr6 16427593 16431397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1581 K01934 - gmx:100527426 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1581 6 16427593 16431397 Gso6g1581 6 16427593 16431397 ECH
Gso4g1480 4 43479343 43483511 Gso6g1581 6 16427593 16431397 GST