Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1480 ATGCGAGCACAGACGCTGATGACACAGTGGTGCACAAGAGCAGCAACGTGTGGCCAATTGAGGATGAGCACTAACACCAACACCCCCAAACACGATGGTCTCGACGCCATTTTCAAACATAAGCGCTTACTTCGAACGCAGGTCAGAAAAACCCTAAAATCCATCCAACCCTCCCTCCGATCTCACCAAGATAACACCGTTCAAGACATAGTTTTGGGAGCTCCGTGGTTCAAATCCAGTCGCAGGCTATGCGCGTACATAAGCTGCGCTGCTCTTCGCGAAGTCGACACTTTAAAAATATTGTCACAAATTTTGCAACATAACAATGCTACTGATGGAAAGAAACTCTATGTGCCGCGCGTGGAGGATAAGAATAGTCACATGCGTATGCTCCACATATCGGGAATTGATGATCTCATTGCAAACTCAATGGACATCTTAGAGCCTGCTCCGGTTGATGTTGATGGAAATGCGCGTGAAGATGTTATGCAGGCAAATGATCCAGTTGATTTGTTCCTTTTACCTGGACTGGCATTTGACAGATCTGGAAGACGTTTAGGTCGTGGCAGAGGTTACTATGATACATTCCTGAAGAATTACCAAGACCTTGCAAAGACGCGGAATTGGAAGCAGCCCTTGCTTGTTGCACTGTCGTATTCCGAACAAATACTGGATGAAGGACTAATACCAATGACTTCATCTGATCTTCCAGTTGATGCTCTTGTATCTCCGGAAGGTGTGATTCCCATCAGTAAAACTGCCTTAAACAGCATGGATCTCTGA 783 0.4585 MRAQTLMTQWCTRAATCGQLRMSTNTNTPKHDGLDAIFKHKRLLRTQVRKTLKSIQPSLRSHQDNTVQDIVLGAPWFKSSRRLCAYISCAALREVDTLKILSQILQHNNATDGKKLYVPRVEDKNSHMRMLHISGIDDLIANSMDILEPAPVDVDGNAREDVMQANDPVDLFLLPGLAFDRSGRRLGRGRGYYDTFLKNYQDLAKTRNWKQPLLVALSYSEQILDEGLIPMTSSDLPVDALVSPEGVIPISKTALNSMDL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1480 260 PANTHER ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE 14 259 - -
Gso4g1480 260 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE, MITOCHONDRIAL-LIKE ISOFORM X1 14 259 - -
Gso4g1480 260 SUPERFAMILY NagB/RpiA/CoA transferase-like 40 250 IPR037171 -
Gso4g1480 260 TIGRFAM MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 41 243 IPR002698 -
Gso4g1480 260 Pfam 5-formyltetrahydrofolate cyclo-ligase family 41 244 IPR002698 -
Gso4g1480 260 Gene3D - 34 247 IPR024185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1480 Gso-Chr4 43479343 43483511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1480 K01934 - gmx:100777775 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1480 4 43479343 43483511 Gso6g1581 6 16427593 16431397 GST