Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1563 ATGGCGCTACGCGTACTTCTTGTGTTGGGGATGTTGCTGATGTTGTGCCTTGTTAAGGTTTCATCTGATCCAAAGATAGAAGAAGAAATACTGGAAGCAGAAGAAGAATTGCAGTTTCCCGATAACGAGCCACTTATCGTGAGAGACGCGAACAGAAGGCTAATGCAAGATATGGATTGTGGTGGGTTGTGCAAGACGAGGTGCAGTGCACATTCGAGGCCCAACTTGTGCACTAGGGCGTGTGGCACGTGCTGTGTGAGGTGCAAGTGTGTCCCACCTGGTACATCTGGAAATAGGGAACTATGTGGAACCTGCTACACTGATATGACCACCCATGGCAACAAGACCAAGTGCCCTTAG 360 0.4917 MALRVLLVLGMLLMLCLVKVSSDPKIEEEILEAEEELQFPDNEPLIVRDANRRLMQDMDCGGLCKTRCSAHSRPNLCTRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1563 119 Pfam Gibberellin regulated protein 59 119 IPR003854 -
Gso6g1563 119 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 3 119 - -
Gso6g1563 119 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 3 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1563 Gso-Chr6 16137399 16138776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1563 - - gmx:100789576 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1563 6 16137399 16138776 Gso6g1563 6 16137399 16138776 ECH
Gso4g1504 4 43894276 43895637 Gso6g1563 6 16137399 16138776 GST
Gso5g0285 5 2976172 2977693 Gso6g1563 6 16137399 16138776 PCT
Gso17g0782 17 7272249 7273879 Gso6g1563 6 16137399 16138776 PCT
Gso6g1563 6 16137399 16138776 Gso5g0285 5 2976172 2977693 PCT
Gso6g1563 6 16137399 16138776 Gso17g0782 17 7272249 7273879 PCT