Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0285 ATGGCATTACGCGAGCTTATTGTGATGGGGTTATTGCTGCTGGTTTGTCTTGCAAAGGTTTCATCTGATGTTAACATAGAAAAGGAGCAAGATGAAGAATTTCGCTTTCCTGTTGACCATCTTATCGTGAGAGGCGGGAACAGAAGGCTAATGCAGGACATAGATTGTGGAGGATTGTGCAAGACAAGGTGCAGTGCCCATTCAAGGCCAAATGTGTGCAACAGGGCTTGTGGCACATGTTGTGTGAGGTGCAAGTGTGTTCCACCTGGAACTTCCGGCAACAGGGAGCTTTGTGGGACCTGCTATACTGATATGACCACCCATGGTAACAAGACCAAGTGCCCGTAA 348 0.477 MALRELIVMGLLLLVCLAKVSSDVNIEKEQDEEFRFPVDHLIVRGGNRRLMQDIDCGGLCKTRCSAHSRPNVCNRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0285 115 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 4 115 - -
Gso5g0285 115 Pfam Gibberellin regulated protein 55 115 IPR003854 -
Gso5g0285 115 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 4 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0285 Gso-Chr5 2976172 2977693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0285 - - gmx:100306333 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0285 5 2976172 2977693 Gso17g0782 17 7272249 7273879 GST
Gso5g0285 5 2976172 2977693 Gso4g1504 4 43894276 43895637 PCT
Gso5g0285 5 2976172 2977693 Gso6g1563 6 16137399 16138776 PCT
Gso4g1504 4 43894276 43895637 Gso5g0285 5 2976172 2977693 PCT
Gso6g1563 6 16137399 16138776 Gso5g0285 5 2976172 2977693 PCT