Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1558 ATGGCAGGAGGAGGAGCTCCAGCTAAAGCAGATGAGCCACAGCCACATCCACCAAAGGATCAGTTACCAAATATTTCTTACTGTATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTTGGCACAACTGTGTTGATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATAATGAGAAGGCAAGAGTTATCGAAACCCTGCTTTTTGTAGCTGGTATTAACACATTGTTGCAAACAATGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTACACCTTTGTTCCAACCACAATCTCAATTATCCTTGCTGGCCGATTCAGTGATGAACCAGATCCTATAGAGAAATTCAAGAGGATAATGAGGTCAATCCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTGGGCTTCAGTGGTCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCGTCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGGTTCCCTGGGGTAGCTAAATGTGTAGAGATCGGATTGCCTCAGCTTATATTGCTAGTATTTGTTTCACAGTATGTGCCCCATGTGCTACATTCGGGAAAACATATCTTCGACCGTTTTGCTGTGTTATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTTACTGTTGGAGGGGCCTATAATGATGCTCCACATAAAACTCAGATATCATGCCGCACTGACCGTGCTGGACTTATTGATTCTGCTCCTTGGATAAGAATTCCATATCCATTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCTTTTGTTGCTCTTGTGGAGTCCAGTGGAGCTTTCATTGCTGTATATAGGTATGCAAGTGCAACGCCATTGCCACCATCTATTCTCAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTCAATGGATCCTCTGTGTCTGTAGAAAATGCAGGTCTTTTGGCTTTGACACGTGTTGGAAGTAGAAGAGTGGTGCAAATCTCTGCCGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTTGCCTCTATCCCACCTCCCATTATTGCTGCCCTGTACTGCTTGTTCTTTGCTTATGTTGGTGCTGGTGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAGTTCATTTTAGGCTTCTCAATCTTCGTGGGCTTGTCCGTGCCACAGTACTTCAACGAGTACACAGCAATTAATGGTTATGGTCCAGTCCACACAGGCGCAAGATGGTTCAATGATATAATCAACGTCCCATTCCAATCAAAGCCATTTGTTGCTGGTGTTGTGGCATATTTTCTAGACAACACTTTGTTTAAGAGAGAAGCTGCTATTAGGAAGGACAGAGGTAAACATTGGTGGGACAAGTACAAGTCCTTCAAGGGTGACACAAGAAGTGAGGAGTTCTATTCCCTTCCTTTCAATCTAAACAAGTACTTCCCCTCTGTTTAA 1596 0.4323 MAGGGAPAKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNNEKARVIETLLFVAGINTLLQTMFGTRLPAVIGGSYTFVPTTISIILAGRFSDEPDPIEKFKRIMRSIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPQLILLVFVSQYVPHVLHSGKHIFDRFAVLFTIVIVWIYAHLLTVGGAYNDAPHKTQISCRTDRAGLIDSAPWIRIPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFVGLSVPQYFNEYTAINGYGPVHTGARWFNDIINVPFQSKPFVAGVVAYFLDNTLFKREAAIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1558 531 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g1558 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso6g1558 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 531 - -
Gso6g1558 531 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1558 Gso-Chr6 16060759 16067926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1558 6 531 Organic Solute Cotransporters AT5G49990 79.278 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1558 - - gmx:100812585 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1558 6 16060759 16067926 Gso6g1558 6 16060759 16067926 ECH
Gso4g1509 4 43948928 43958168 Gso6g1558 6 16060759 16067926 GST
Gso5g0290 5 3032454 3038979 Gso6g1558 6 16060759 16067926 PCT
Gso17g0777 17 7205519 7211897 Gso6g1558 6 16060759 16067926 PCT
Gso6g1558 6 16060759 16067926 Gso5g0290 5 3032454 3038979 PCT
Gso6g1558 6 16060759 16067926 Gso17g0777 17 7205519 7211897 PCT