Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0290 ATGGCAGGAGGTGGTGGAGCTCCAGCACCTAAGATTGATGAGCCACAACCTCATCCCCCGAAGGATCAGTTACCGAATGTTTCTTACTGCATTACGAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTCGGTACAACTGTGCTAATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATCCAAACTCTACTTTTTGTAGCTGGAATTAACACATTGCTGCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTACGTTGCAACAACAATCTCTATTATTCTTTCTGGTCGATTCAGTGATGAGCCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTTTGGCGAAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTTTATGAGTTAGGCTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCAGAGCTTATATTACTAGTATTTATTTCACAGTTTGTACCTCATGTGCTACATGCAGGAAAACATGTCTTCGATCGGTTCGCTGTTTTATTTACAATTGCAATTGTATGGTTATATGCTTATCTGCTCACTGTTGGAGGGGCATACAACCATGCTGCACCTAAAACACAGTCAACCTGTCGCACTGATCGATCTGGTTTAATAGAATCTGCCCCATGGATACGAGTTCCTTATCCATTTCAATGGGGAGCACCTACATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTATTGCTGTCTATCGGTATGCAAGTGCAACACCATTACCACCATCTATTCTTAGTCGCGGCATCGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACTGGCAATGGATCCTCTGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTAACTCGTGTTGGCAGTCGAAGAGTGGTGCAAATAGCGGCCGGTTTTATGATTTTCTTTTCAATTCTCGGGAAATTTGGAGCCGTTTTTGCATCCATTCCACCTCCCATTGTTGCTGCACTGTACTGCTTGTTTTTCGCTTATGTTGGAGCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAATATTTGTATTAGGCTACTCCATCTTCATTGGCTTGTCTGTGTCGCAGTACTTCAATGAGTACACAGCAATTAATGGTTATGGTCCGGTTCACACCAAAGCAAGATGGTTCAATGATATAATCAATGTCCCGTTCCAATCAAAAGCCTTTGTTGCGGGTTGTGTGGCATATTTCTTGGACAACACACTACATAAGAAGGAAGCTGCTATTCGGAAAGATAGAGGAAAGCATTGGTGGGACAAGTACCGTTCCTTCAAGACTGACACAAGAAGTGAAGAGTTTTATTCACTGCCTTTCAACCTCAACAAATACTTCCCATCTGTGTAA 1602 0.4332 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVATTISIILSGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFISQFVPHVLHAGKHVFDRFAVLFTIAIVWLYAYLLTVGGAYNHAAPKTQSTCRTDRSGLIESAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTIFVLGYSIFIGLSVSQYFNEYTAINGYGPVHTKARWFNDIINVPFQSKAFVAGCVAYFLDNTLHKKEAAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0290 533 MobiDBLite consensus disorder prediction 1 27 - -
Gso5g0290 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso5g0290 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 533 - -
Gso5g0290 533 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0290 Gso-Chr5 3032454 3038979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0290 9 533 Organic Solute Cotransporters AT5G49990 80.608 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0290 - - gmx:100804903 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0290 5 3032454 3038979 Gso17g0777 17 7205519 7211897 GST
Gso5g0290 5 3032454 3038979 Gso4g1509 4 43948928 43958168 PCT
Gso5g0290 5 3032454 3038979 Gso6g1558 6 16060759 16067926 PCT
Gso4g1509 4 43948928 43958168 Gso5g0290 5 3032454 3038979 PCT
Gso6g1558 6 16060759 16067926 Gso5g0290 5 3032454 3038979 PCT