Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1537 ATGAACAAATCGCAGTCGAAGAACTCCGAGTCGTCGACTCAGTTCGACTCGCCGCACTGGGACGGCACCGAGTCGCCGGAAAAATCGCCGGAGAAGCGCGACAACTCCGTGGCCATCGTGACCGTTGGCAAGCTCAAGCAGTTCACACCGGAGAAGCGCGCGGAGCACCGGGAACCGCCGGAAAATCCGCCGTCGGCGGCGGTGGTGATGTTCAACGACCAGGCGGCGGAGGAGGATCAGAGGACGGCGGAAAAGGCGGTTCCGGCGGTCGGCGGAGGAGAACGGAGATCAAGGTCGGCGGCGGCGGCGGAGGGGTGGAAGACGGACGAGACGGTGAGCAAGGCGGCGCTGGGGTTCCGGCTGAGCGAGGTGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCCGCAGATAAGACGCAAGGTTGGAGTGGTGATTCATTTGATCGCTATAAAGAATATAGGTATTGTTTATCTGTGAATATTATTGGATTTGCATACTCTGCATTACAAGCATGTGATTTGACATGCCAACTTGCCACGGGGAAACGCTTAATCAGTCACCACCTTCGCAACCACTTTGATTTCTTCATGGATCAGGTTCTGGCATATCTTCTGATATCGTCATCATCGTCTGCAGCCACACGGGTTGAGGATTGGATATTGAATTGGGGGAAAGACGAGTTCACAGAAATGGCCACTGCTTCAATTGGAATGGCCTTCCTCGCTTTCGTTGCCTTTGCTATCAGCTCACTCATCTCTGGTTACACTCTATGCAACCGAAGCTCCATGTGA 792 0.5429 MNKSQSKNSESSTQFDSPHWDGTESPEKSPEKRDNSVAIVTVGKLKQFTPEKRAEHREPPENPPSAAVVMFNDQAAEEDQRTAEKAVPAVGGGERRSRSAAAAEGWKTDETVSKAALGFRLSEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNIIGFAYSALQACDLTCQLATGKRLISHHLRNHFDFFMDQVLAYLLISSSSSAATRVEDWILNWGKDEFTEMATASIGMAFLAFVAFAISSLISGYTLCNRSSM* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1537 263 PANTHER CASP-LIKE PROTEIN 46 263 - -
Gso6g1537 263 MobiDBLite consensus disorder prediction 1 105 - -
Gso6g1537 263 Pfam Casparian strip membrane protein domain 111 245 IPR006702 -
Gso6g1537 263 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g1537 263 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 46 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1537 Gso-Chr6 15817598 15819700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1537 - - gmx:100808291 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1537 6 15817598 15819700 Gso6g1537 6 15817598 15819700 ECH
Gso5g0310 5 3233838 3235500 Gso6g1537 6 15817598 15819700 PCT
Gso17g0759 17 7034717 7036201 Gso6g1537 6 15817598 15819700 PCT
Gso6g1537 6 15817598 15819700 Gso5g0310 5 3233838 3235500 PCT
Gso6g1537 6 15817598 15819700 Gso17g0759 17 7034717 7036201 PCT