Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0310 ATGAACACCTCCGACTCACCCACAAACTTCGACTCGCCCCACTCACCTCTCCGTTCCTCCCCGCTCTCCGATAACGGCGACCCCTTCCACTCGCCGGAAAACTCGCCGCAAAATGACCTCCGCGACAACTCCCGCGCCATCGTCATCGTCGAGACAACATCAACTCAGTTCGCCCAGGCCGCGCCCCCCGCGCCGGAATCCGAGCACCGGAACCCGCCGCCGGAGACCTTCATCACCCGTCCCGTGAGGCCGGATACGAGGTCTCCGGGCGTTGTTGGTCGGACGCGACCGAGGGCGGTGGCGCCGCCCAGGCCGATGGTGCCAAAAAGAGAGGTGATGGCGAAAAAGGTGGCGTTTTGTTTCCGGTTAAGCGAAGTAGTGCTGTGTCTGATTTCGTTTTCGGTTATGGCCGCGGATAAGACCCGTGGTTGGAGCGGTGATTCTTTTGACCGCTACAAGGAATACAGGTATTGTTTATCAGTGAATGTTATTGCATTTGTATACGCAGCGTTTCAAGCGGGTGATCTGGCGTATCAAGTAGTAACGGGGAGACGCATAATCAATCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGTTTTGGCGTATCTTTTGATATCGGCTGCATCATCTGCTGCCACAAGGGTTGATGACTGGCAATCGAATTGGGGAAAAGATGAGTTCACAGAGATGGCTAGTGCTTCAATTGCGTTGGCCTTTCTTGCTTTTGTTGCCTTTGCTATTAGCTCCTTATTCTCTGGCTACAACCTCTGCACTCTGTTCTCATAG 795 0.5409 MNTSDSPTNFDSPHSPLRSSPLSDNGDPFHSPENSPQNDLRDNSRAIVIVETTSTQFAQAAPPAPESEHRNPPPETFITRPVRPDTRSPGVVGRTRPRAVAPPRPMVPKREVMAKKVAFCFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQAGDLAYQVVTGRRIINHHLRYHFDFFMDQVLAYLLISAASSAATRVDDWQSNWGKDEFTEMASASIALAFLAFVAFAISSLFSGYNLCTLFS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0310 264 MobiDBLite consensus disorder prediction 1 104 - -
Gso5g0310 264 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 74 261 - -
Gso5g0310 264 Pfam Casparian strip membrane protein domain 114 247 IPR006702 -
Gso5g0310 264 PANTHER CASP-LIKE PROTEIN 4A3 74 261 - -
Gso5g0310 264 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0310 Gso-Chr5 3233838 3235500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0310 - - gmx:100812568 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0310 5 3233838 3235500 Gso17g0759 17 7034717 7036201 GST
Gso5g0310 5 3233838 3235500 Gso6g1537 6 15817598 15819700 PCT
Gso6g1537 6 15817598 15819700 Gso5g0310 5 3233838 3235500 PCT