Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1535 ATGCCGGGAATTGTTAGAAACGGGGTTCATCATGATGAAGGTGGGAGTAATGACATGAATGGGGACCATGATTCCACCTCTAAGGAACCCTTGAATCTGGTTAAGTCCCCGAGGGGTGGTTCCGTGAGTCCGCAAAGAGGCCAGGGTGATGATGGTGCTAATTTTGGGGGTGATGAGGTAGTTGAGCCCTCCATTGAACAGCTTTATGAGAATGTGTGTGACATGCAGAGTTCCGATCAGTCGCCATCAAGGCAAAGCTTTGGATCAGATGGCGACGAGTCTAGAATTGATTCAGAGTTGAGGCATCTAGTTGGAGGACGGATGAGGGAGGTGGAGATAATGGAGGAGGAAGTGGGGGAGGAGAAAGGGCTGCCAGAAGGGAGTTCAAGTAGTGAAATATCTTCTGCATTGGGTGGCTTGTCCAATGATAAGAAGTTGAATCAGGTGGATGAGATTCAGGAGGTTCAGCCTGCAGCTACAAGTTCTGGTTCCTCAGAAAAATCTATCAAAGCATCGATTTCAATGGTGGGACCTGATAATACTTCACCCAAATCGACTTCCAAGGGAAAAATTCCTCTTTCAAAAGCTCCCATTCCAAGAAATAATGGTAAGCCTTTGAGGAAACAGATTAGTGGGGCTACTACTGGCGTGAAGACTACTAAGAATTCTCCTATGGGTAAGTCAGTGTCACGAAACCGAGCTGAGAGTACGGCTGAGTCGGCATTAGAGAAACCTGAGCGGGCACCGGTATTGCTAAAGCAAGCAAGAGATCTGATTTCATCAGGAGATAATCCACATAAGGCTCTTGACTTGGCTCTTCAAGCAATGAAACTATTTGAGAAGTTTGGTAATGAGAAACCAAGTTTGGAGCTGGTTATGTGTTTACATGTTACAGCAGCGATATATTGCAGTTTGGGTCAATATGGTGAGGCAATTCCGATTCTTGAGCGCTCAATTGAGGTTCCTGTTATTGGGGAAAGCCAACAACACGCCCTTGCTAAATTTGCTGGTCACATGCAATTGGGAGACACCTATGCTATGCTGGGCCAGCTTGAGAATTCAACAATGTGCTACACCACTGGGTTAGAAGTTCAGAAGCAGATTTTGGGAGAGACAGACCCTAGGGTTGGTGAAACTTGCCGGTATGTGGCTGAAGCTAATGTTCAAGCTTTGCAATTTGATGAAGCAGAGAGGCTGTGTCAAATGGCTCTTGACATTCATATAGCAAATAATTCAGCTCCATCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAGACAAAGGGAAATCATGAAACAGCTCTTGAGCATCTTGTTTTAGCAAGCATGGCAATGGTAAGTAACGACCAAGAAGCAGAAGTGGCATCTGTTGACTGCAGCATTGGAGACACATACTTATCCTTGTCTCGATATGATGAGGCTGTCTTTGCATATCAGAAAGCGCTAACAGTTTTCAAGACCAGCAAAGGAGAGAATCACCCAGCAGTGGGATTAGTCTTTGTACGTTTGGCGGACCTGTATAACAGGACAGGGAAGATAAGGGAATCGAAATCATATTGCGAGAGTGCACTTAAAATATATGAGAATCCAATGCCTGGAATTCCTCCGGAGGAGATTGCCAGTGGTCTTACGAATATCTCAACTATCTACGAGTCAATGAATGAGCTTGAACATGCACTCAAGTTACTGCAGAAAGCACTAGAGATATATAATGATACCCCTGGTCAGCAAAGCACAATAGCTGGAATTGAAGCTCAGATGGGAGTCATGTACTACATGTTGGGGAACTATTCCAAATCCTACAACACTTTGAAGAATGCTATTTCAAAGCTTCGTGCTATTGGAGAAAAGAAATCATCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTCGCCTGTGTGCAGCGTTATGCCTTAAGTGAGGCTACAGAATTATTTGAAGAAGCAAAGAGTATTTTGGAACAAGAATATGGACCGTATCACCCAGAAACACTTGGGGTCTCTAGTAATCTTGCTGCCACGTATGATGCAATTGGCAGGCTGGACGATGCAATACAAATTCTGGAGTACGTTGTTAACACGAGGGAGGAAAAACTCGGGACCGCAAATCCTGAGGTGGATGATGAGAAGAGAAGGCTGGGTGAGTTGTTGAAGGAAGCAGGTAGAGTTCGGAGCAGAAAAACCAGGTCACTTGAGAACCTTCTTGATGGCAATGCTCACGCTGCAAACAACGTTGTCATCAGGGCATGA 2262 0.45 MPGIVRNGVHHDEGGSNDMNGDHDSTSKEPLNLVKSPRGGSVSPQRGQGDDGANFGGDEVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEEKGLPEGSSSSEISSALGGLSNDKKLNQVDEIQEVQPAATSSGSSEKSIKASISMVGPDNTSPKSTSKGKIPLSKAPIPRNNGKPLRKQISGATTGVKTTKNSPMGKSVSRNRAESTAESALEKPERAPVLLKQARDLISSGDNPHKALDLALQAMKLFEKFGNEKPSLELVMCLHVTAAIYCSLGQYGEAIPILERSIEVPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSTMCYTTGLEVQKQILGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHIANNSAPSLEEAADRRLMGLICETKGNHETALEHLVLASMAMVSNDQEAEVASVDCSIGDTYLSLSRYDEAVFAYQKALTVFKTSKGENHPAVGLVFVRLADLYNRTGKIRESKSYCESALKIYENPMPGIPPEEIASGLTNISTIYESMNELEHALKLLQKALEIYNDTPGQQSTIAGIEAQMGVMYYMLGNYSKSYNTLKNAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEQEYGPYHPETLGVSSNLAATYDAIGRLDDAIQILEYVVNTREEKLGTANPEVDDEKRRLGELLKEAGRVRSRKTRSLENLLDGNAHAANNVVIRA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1535 753 MobiDBLite consensus disorder prediction 153 189 - -
Gso6g1535 753 MobiDBLite consensus disorder prediction 11 29 - -
Gso6g1535 753 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 742 - -
Gso6g1535 753 SMART tpr_5 335 368 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 669 702 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 377 410 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 585 618 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 627 660 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 459 492 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 292 325 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 544 577 IPR019734 GO:0005515
Gso6g1535 753 SMART tpr_5 501 534 IPR019734 GO:0005515
Gso6g1535 753 Pfam Tetratricopeptide repeat 544 576 - -
Gso6g1535 753 Coils Coil 557 577 - -
Gso6g1535 753 MobiDBLite consensus disorder prediction 207 236 - -
Gso6g1535 753 ProSiteProfiles TPR repeat profile. 544 577 IPR019734 GO:0005515
Gso6g1535 753 MobiDBLite consensus disorder prediction 1 247 - -
Gso6g1535 753 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 742 - -
Gso6g1535 753 MobiDBLite consensus disorder prediction 90 123 - -
Gso6g1535 753 SUPERFAMILY TPR-like 457 586 IPR011990 GO:0005515
Gso6g1535 753 SUPERFAMILY TPR-like 290 440 IPR011990 GO:0005515
Gso6g1535 753 SUPERFAMILY TPR-like 586 727 IPR011990 GO:0005515
Gso6g1535 753 Gene3D Tetratricopeptide repeat domain 231 410 IPR011990 GO:0005515
Gso6g1535 753 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Gso6g1535 753 Pfam Tetratricopeptide repeat 458 533 - -
Gso6g1535 753 Pfam Tetratricopeptide repeat 628 694 - -
Gso6g1535 753 MobiDBLite consensus disorder prediction 127 142 - -
Gso6g1535 753 Gene3D Tetratricopeptide repeat domain 442 620 IPR011990 GO:0005515
Gso6g1535 753 Gene3D Tetratricopeptide repeat domain 621 733 IPR011990 GO:0005515
Gso6g1535 753 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1535 Gso-Chr6 15768138 15772400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1535 - - gmx:100783201 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1535 6 15768138 15772400 Gso6g1535 6 15768138 15772400 ECH
Gso5g0312 5 3254510 3257693 Gso6g1535 6 15768138 15772400 PCT
Gso6g1535 6 15768138 15772400 Gso5g0312 5 3254510 3257693 PCT