Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1529 ATGGCTGGTTCTCTTCAAAACCAACGACAACAACTTCTTGGAATTATCGAAGAAGAAGAACAAGAGAAATTGCAGAAACAGAAAGAAGAGACTGAGGGGAACAACAACAATAATAACAATAACAAGAGTGACATGGCTCCTACGGCAGGGAATTCGATCCACAGGTCGGGTTCGAGGCCGCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCATCTTGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGATCAATCATGGGATGATAAAAGGAAGAGAAGCATGAAGGAGCCATTGGGGCTTTCTAATGGTAACAGGAGAAGCTTCCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCTAAGCAGCTTCACTGTGGTGGGTTGGAGTCACATTATTCTGATGGTGTGACTGATCAGAATGGCATAATTAAGGCTACTGGAGGTGGAGCATATAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTGGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAACCTAATGATTTATTCCCATATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGTAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGGACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAACTATGGACATGCTAGTTGGGGACATTTACGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTCGGAAAAACGATATCAGAAAAAAAGGAACTTGAAGAGTACAGACCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAATGCGTTGCGATTTCGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCTAATGGGGAAGCACAAGCAATGTTCTTGCGTCATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCTCCACTTGGAGATTTAAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCACTTGCTGGAACTACTGGGCTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACGTTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGATCCCAATACGATTGATCTCTCAGATCATAGTGAATTAGAATATTGGCTCACCATTTTATCAGAGCACTTACCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCTCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCATATGGGAAGTTAGGCCTTGCCAATCTCTTGGAAATGAGGGAAGAGTGCTTGAGAGAATTTCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTTTTACCTGACTTGCTGGTGGAACTTGATAGTATGGACGAGGAATCAAGGCTGCTTACACTAATTGAAGGTGTTCTTGCAGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTATAGAATGAGCCGCAATAAAATGTGCAGACCTTGGCGGGTGGATGATTTTGATGACTTTAAAGAGAGAATGTTAGGGACCGGGGACAAGAAAATGCCCCATCATAAGAGGGCTTTACTTTTCGTAGATAACTCAGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCACTTCCTGCCTTAAATGATGTCACTGCAATGGAGCTTCCTGATATTGTAGCTGAAGCTGCCAAGCATTGTGACATTCTTAGGAGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAGACAGCTCTAAGGAAAATCCTTCTTCAGTCCCCTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTAGCTGCTGCTGCAAAAGATGCTGATCTGATAATTTTGGAAGGGATGGGGAGAGCACTTCATACTAACCTAAATGCTCGGTTTAAGCGTGATGCTTTAAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAAAAATTGGTTAAAGGGAACATATACGACTGTATTTGCAAATACGAGCCTGCAAGTTGA 2739 0.4261 MAGSLQNQRQQLLGIIEEEEQEKLQKQKEETEGNNNNNNNNKSDMAPTAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSWDDKRKRSMKEPLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESHYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYDPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMCRPWRVDDFDDFKERMLGTGDKKMPHHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTSDSSKENPSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKRDALKLAMVKNQRLAEKLVKGNIYDCICKYEPAS* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1529 912 Gene3D - 83 243 - -
Gso6g1529 912 SUPERFAMILY Actin-like ATPase domain 202 435 IPR043129 -
Gso6g1529 912 SUPERFAMILY AF1104-like 528 910 IPR036075 -
Gso6g1529 912 PIRSF PanK_long 45 912 IPR015844 GO:0004594|GO:0015937
Gso6g1529 912 Pfam Damage-control phosphatase ARMT1-like domain 619 898 IPR002791 -
Gso6g1529 912 Pfam Fumble 91 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso6g1529 912 Gene3D - 312 424 - -
Gso6g1529 912 PANTHER PANTOTHENATE KINASE 2 39 834 - -
Gso6g1529 912 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 713 910 - -
Gso6g1529 912 Coils Coil 2 41 - -
Gso6g1529 912 MobiDBLite consensus disorder prediction 1 63 - -
Gso6g1529 912 TIGRFAM panK_eukar: pantothenate kinase 91 434 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso6g1529 912 MobiDBLite consensus disorder prediction 15 30 - -
Gso6g1529 912 PANTHER PANTOTHENATE KINASE 39 834 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso6g1529 912 SUPERFAMILY Actin-like ATPase domain 90 230 IPR043129 -
Gso6g1529 912 MobiDBLite consensus disorder prediction 31 63 - -
Gso6g1529 912 Gene3D - 549 634 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1529 Gso-Chr6 15648693 15662462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1529 K24265 - gmx:100781580 1746.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1529 6 15648693 15662462 Gso6g1529 6 15648693 15662462 ECH
Gso5g0318 5 3312757 3316477 Gso6g1529 6 15648693 15662462 PCT
Gso17g0752 17 6940908 6952546 Gso6g1529 6 15648693 15662462 PCT
Gso6g1529 6 15648693 15662462 Gso5g0318 5 3312757 3316477 PCT
Gso6g1529 6 15648693 15662462 Gso17g0752 17 6940908 6952546 PCT