Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0752 ATGAATTTTCTTCTACAAAAGGAGGGTTTGGTGAATTTCATTTCATTATTGGATTTGAGGTTGAAACTTGAAACTTTGAGACTCAGAGAGAGAGAGATGGCGCACACGGGCAGCAACAGTTCAATGCACCGGTCGAGTTCACGGCCTCAGCTGGATCTGAGCAAAGCAGAAATTCAAGGAAACTTCGAAGAGAAGTATCCAACCATTTTGCTACCCAATCAGTCTCATGATATATCTCACCTCGCTCTTGATATTGGAGGATCTCTTATAAAGTTGGTGTACTTTTCAAGACACCAAGACCAATCAACCTATGACAAAAGGGTGAAAAATGTGAAGAATCGACTGGGATTTCCACCCAATGGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAAACTAGCAAGATTAACGAGTGCCTAGACTTCATTAGCTCAAAGCAGCTTCACTCTGCTGGTGGAGGGGAATCACGTTATTCTGATGCCAGGACTGATTCAAATGCCATAATTAAGGCTACTGGTGGTGGGGCACACAAATTTGCTGACCTTTTCAAAGAAAGACTCGGACTGAGTCTTGACAAAGAAGATGAAATGAGCTGTCTTGTAGCAGGAGCAAATTTCTTGCTGAAGGCAATTCGTCATGAAGCTTTTACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACACTAACGACTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGACGGAAAATATGAGAGGGTCAGTGGGACTAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGGCTGTTAACAAAGTGTGAGAGCTTTGATGAATTACTTGAGCTGAGTCAGAAAGGAGATAATAGTAATACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGATTGGCCTATCGGCTTCTACCATTGCTTCAAGTTTTGGCAAGGCTACCTCAGAAAAAAAGGGACTTGAAGATTACAGACCTGAAGATATATCGCTCTCTCTTCTACGAATGATTTCATACAATATTGCCCAGATAGCCTACTTAAATGCATTGCGGTTTGGGTTGAAGCGTATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAATGGGGCTGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCATTAGGTGCATTTATGAGTTATGAAAAGCATGGTTTAGATGACCTAATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCCCCACTTAGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTCTACAAAAGGTAACTGAGATCACTGCCCCTGTGCCGATGGCTCCTCCTGGAACTACTGGACTCGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAACGTTGGTGTCCTACATCTAGTACCCACTTTAGAGGTGTTTCCATTGCTAGCAGACCTGAAAATGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCAAGATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGGACTGATGATGCCAAGAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACCTGGCTAGGTTAATGGAGGAGCCTGCTGCATACGGGAAGTTAGGTCTGGCCAGACTACTGGAAATGAGGGAAGAATGCTTGAGGGAATTTCATTTTTTTGATGCGTATATAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTCCTACCTGATTTGTTGATGGAGCTTGATAGCATGGATGAGGAAACAAGACTACTTACTCTCATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCAGAGACCTTGGCGTGTGGATGATTTTGATGCCTTTAAACAAAGAATGTTAGGAACTGGGGACAAGAAACCACCCCCACATAGAAGAGCTTTACTTTTTGTGGACAATGCAGGTGCTGACATTGTTCTTGGGATGCTTCCCCTGGCACGAGAGCTCCTCCGCCGTGGAACTGAAGTGGTCCTGGTTGCAAACTCCCTTCCTGCTTTGAATGATGTGACCGCAATGGAGCTCCCTGACATTGTTGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAATCTGGTGGCTTGCTGGTGGATGCAATGACTAATACCTTGGACAGTCCTAGAGAAAATTCTTCTTCTGTTCCCTTGATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTGAGACAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCCCGATTTCAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAAAGGTTGGCTGAAAAGTTGATTAAAGGGAACATTTACGACTGTATATGCAAATACGAACCTGCTAACTGA 2709 0.4326 MNFLLQKEGLVNFISLLDLRLKLETLRLREREMAHTGSNSSMHRSSSRPQLDLSKAEIQGNFEEKYPTILLPNQSHDISHLALDIGGSLIKLVYFSRHQDQSTYDKRVKNVKNRLGFPPNGNRRSYPILGGRLHFVKFETSKINECLDFISSKQLHSAGGGESRYSDARTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMSCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKYERVSGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNSNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKGLEDYRPEDISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDLNEKISWMEKFLQKVTEITAPVPMAPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADLKMYEPNTIDLSDHSELEYWFKILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLARLLEMREECLREFHFFDAYISIKQRENEASLAVLPDLLMELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKQRMLGTGDKKPPPHRRALLFVDNAGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMTNTLDSPRENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFQCDALKLAMVKNQRLAEKLIKGNIYDCICKYEPAN* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0752 902 Pfam Damage-control phosphatase ARMT1-like domain 609 888 IPR002791 -
Gso17g0752 902 PANTHER PANTOTHENATE KINASE 2 16 824 - -
Gso17g0752 902 TIGRFAM panK_eukar: pantothenate kinase 80 425 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso17g0752 902 SUPERFAMILY Actin-like ATPase domain 193 426 IPR043129 -
Gso17g0752 902 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 703 900 - -
Gso17g0752 902 Gene3D - 73 234 - -
Gso17g0752 902 Gene3D - 305 415 - -
Gso17g0752 902 PANTHER PANTOTHENATE KINASE 16 824 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso17g0752 902 Coils Coil 901 902 - -
Gso17g0752 902 Gene3D - 539 623 IPR035073 -
Gso17g0752 902 Pfam Fumble 80 424 IPR004567 GO:0004594|GO:0005524|GO:0015937
Gso17g0752 902 SUPERFAMILY AF1104-like 517 900 IPR036075 -
Gso17g0752 902 SUPERFAMILY Actin-like ATPase domain 78 221 IPR043129 -
Gso17g0752 902 PIRSF PanK_long 33 902 IPR015844 GO:0004594|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0752 Gso-Chr17 6940908 6952546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0752 K24265 K09680 gmx:100783082 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0318 5 3312757 3316477 Gso17g0752 17 6940908 6952546 GST
Gso17g0752 17 6940908 6952546 Gso6g1529 6 15648693 15662462 PCT
Gso6g1529 6 15648693 15662462 Gso17g0752 17 6940908 6952546 PCT