Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1528 ATGCTGAGAATCGCCGCAAGCGCAAAGAGAATTGTTCAAACGGCGTCGTTGGAGGCGCCACCGTTGGGGATTAGGGTTCTGCCGCGTCTCTACCACGAGAGGGTGGTGGACCACTACGACAACCCCCGCAACGTTGGATCCTTCGACAAGAACGACCCCACCGTCGGAACGGGTCTTGTTGGTGCACCCGCGTGTGGCGACGTCATGAAGCTCCAGATTAAGGTTGACGACAAAACGGGGAAGATCGTCGATGCTCGCTTCAAAACCTTCGGTTGTGGATCCGCCATTGCTTCTTCCTCCGTCGCTACTGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTGACCATTAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCAGTCAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAGCGTGCCTCAGCATCTGCTGGTGGACAGGCAACAACTGGAGAGAAAGCTGTCACTGCTTGA 519 0.5202 MLRIAASAKRIVQTASLEAPPLGIRVLPRLYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASASAGGQATTGEKAVTA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1528 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 3 168 IPR002871 GO:0005506|GO:0016226|GO:0051536
Gso6g1528 172 Gene3D - 30 170 - -
Gso6g1528 172 SUPERFAMILY SufE/NifU 30 154 - -
Gso6g1528 172 CDD IscU_like 30 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Gso6g1528 172 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Gso6g1528 172 TIGRFAM iscU: FeS cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1528 Gso-Chr6 15638938 15641238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1528 K22068 - gmx:100806169 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0320 5 3336691 3338857 Gso6g1528 6 15638938 15641238 PCT
Gso17g0749 17 6916948 6918893 Gso6g1528 6 15638938 15641238 PCT
Gso6g1528 6 15638938 15641238 Gso5g0320 5 3336691 3338857 PCT
Gso6g1528 6 15638938 15641238 Gso17g0749 17 6916948 6918893 PCT