Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0320 ATGCTGAGAGTGGGCGCAAAGAGGCTTTTGGGAACGACGTCGTTGGGCGTTAGGGTTCCGGCGAGGCTGTACCACGAGAGGGTTGTGGATCACTACGACAACCCCCGGAACGTTGGATCGTTAGACAAGAACGACCCGAGCGTGGGGACGGGTTTGGTGGGGGCGCCGGCGTGCGGCGACGTGATGAAGCTCCAGATTAAGGTCGACGACAAAACCGGAAAAATCGTCGATGCTCGATTCAAGACTTTCGGTTGTGGCTCCGCCATTGCTTCTTCCTCCGTCGCTACTGAGTGGGTGAAGGGAAAGCAAATGGAGGAAGTTCTGACTATAAAAAATACTGAAATTGCAAAGCATCTTTCACTTCCACCAGTTAAGCTCCACTGCAGCATGCTTGCTGAAGATGCCATCAAAGCAGCCGTTAAAGACTATGAAGCTAAGCGTGCTAAGGCAACTGCTAGCGGAGAGGCAGCAACAGGAGAGAAGCCTGCCATTGCATGA 498 0.5321 MLRVGAKRLLGTTSLGVRVPARLYHERVVDHYDNPRNVGSLDKNDPSVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKATASGEAATGEKPAIA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0320 165 SUPERFAMILY SufE/NifU 23 148 - -
Gso5g0320 165 Pfam NifU-like N terminal domain 24 149 IPR002871 GO:0005506|GO:0016226|GO:0051536
Gso5g0320 165 TIGRFAM iscU: FeS cluster assembly scaffold IscU 24 147 IPR011339 GO:0005506|GO:0016226|GO:0051536
Gso5g0320 165 CDD IscU_like 23 139 IPR002871 GO:0005506|GO:0016226|GO:0051536
Gso5g0320 165 Gene3D - 23 162 - -
Gso5g0320 165 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 16 162 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0320 Gso-Chr5 3336691 3338857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0320 K22068 - gmx:100812566 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0320 5 3336691 3338857 Gso17g0749 17 6916948 6918893 GST
Gso5g0320 5 3336691 3338857 Gso6g1528 6 15638938 15641238 PCT
Gso6g1528 6 15638938 15641238 Gso5g0320 5 3336691 3338857 PCT