Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1521 ATGAATGCGAGAGGCGAGGTCGGTTCACCGGATTCGTTGGGTTCGTTTCCTCCGTTACGGGTTCGGGGATCGGACGGTGCCTCGGACGATTCCGAGTTCGAGCGGTATTGCAGCGCCAACTCGGTGATGGGAACGCCCAACACTAGCATGAGCCTCTGCAGCGCCGTTACGCTCTTCCAAGATTTCTCCGATTGCGATTTCGCTTCTGTCGCCACCGGCGAGGGTTTCGAAAATTTCAGTCCGGGAAAAGGAGCCGCCCCGGAGGTGAATCGCGGCGGCGGCGACCGGAGGAGTTTTCTGTACGGTTCCACTGGATTGGAGATGTACGGTGATTGCAGTGAGGAACTATCTATTACTACGCTCGATTCGTTGGAGATTATAGGGTTTAATCATCGGATCGAAGAGTCGAAAGGGAGCGGTGAAGTGAGTGGTGGAAATGGTTTTGAATTGGAAATTGAGAAAAGAGAAGAAGTGGAAGAAGAAGAGGAAGAGGAAGAAGAAGAGTTATCGGAGGGGGATGATTCTATGTATGACTATGGTAGTGATGGTGGAAATGAAATGTATTTGTCCAAAAATATAGGTTATTATGAGGAGCCGAAAGTGAGAAACGAGAACTCTTTGTTTATGAACTCTTCCGTGGCATTTGGATCGCGAGACCTGGATGATTTTTTGTTGCAGAGTGGTGACATTTCTGTCATGTCTGATCTGTTTCATAATCAGCGAAAAAAGAATAATGGAGTGAATAAAGGTTCTGGTCGAAAGGAGGAAGGGAAAGATGAAAAGGACATGGTCAGAGGCAATGAAGTTGAAGAAACTAAAGATATTGGTTATTCTGATGCTGTAGAAGAGGTTAGGGATAGGGAAATTTCTGCAGATTGTCGTCGTGTTCGAGATTCTGATATGCTTGCTAACACAGTGGAAAGTTCCCCCTCAGTTGATTGTCAGAACTGTATTGAAACGCAGGTCCAAGGTCCTGAAAGTTCTTATGTTGGCAAGGTGGATGAAGTTGATTTGGATCTGCTGGCGAAAGAAGTTCCTCGGAATATGGGTTTGGATGTTAATGATGGTGGTTGCATGGAAAAAGGGAATGCCAACAGTGAAGAAGCTATTGGCACTGGTGATGCTCATGGTGTAAAGTTGGAGCTGGATACTTCTAAGTTCAAGTTTGATCACATAGGTGATAGCCAATTTGATAAGAGTTATTCCAATCCGTCGAACCATATTGGGAATGTTAACACAAAATCAGTTGAGAGTCTTGAGCAAATTGAGCCTGTGTTGGACAACGGAATGAGGAAAACATTAGAGAAGTCTTTCACTTCAACAAATCTCTTAGAAACAAGTCCTGTGGCATCTAAGACAGAAGACTTTGAGCTAAATGAATTCTATGACGAAGTTGTTCAGGAAATGGAAGAAATTTTACTGGAATCTGTGGATTCTCCTGGGGCTAGGCTTTCCATGCGTAACAGATTGACTGAGCCTCAATTTTCTATGCCTTCAAGAGACGGTGGGTTGACTGCTTCTACTTCAAGTACAGATGATGCTTACCTGCTAGTTCAGCGCCAAAGAAAAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGAGTGAAGGAATACACTGTGTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAGGAGATATCGTGATTTCCTCACTCTCTACCGGTGCATGAAAACCTTATTCAATGAGCAAGGCTGGAAATTACCTTTGCCATGGTCTTCTGTTGAAAAGGAAACCCAGATATTTAGAAGTGCATCGCCTGATATTATTGTGAAGAGAAGTGTTCTCATTCAAGACTGTTTACAGTCTATTATCCGGTCCAGGTTTTCTTCAAGTCCTCCTAGAGCATTGATTTGGTTTATATCCCATCAAGATTCATATCCTATTTCACCTGTGTCTCACTCTTTTACAAGAGGGGAAAATATCCGAAGCATTTCCAATTTAGGGAAGACAATTTCACTTATAGTAGAAATTCCACCAAACAAATCTGTGAAACAGTTGTTAGAATCACAACATCACACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAAACTTTGATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACAGGCCAGTTGTTTTGCTCTTCTTGTCACACAAATCAGACCGCAGTCTTGCCAGCCAGGGTTTTACATAATTGGGATTTCACTTACTATCCTGTTTCTCAGCTGGCAAAATCTTATCTGGATTCTATATATGAACAGCCCATGCTTTGTGTCACTGCTGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATATTATGAGTGTCAGAAAAAAGATAGGTACAATGCTTCCGTATGTTCGCTGCCCATTTCGGAGGTCTATCAACAGAGGACTTGGAAGCAGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGACTTGATTGATCTTTCCAGAGGAGTCTTTGCTGCGCTTCCTGTGATGGTGGACACCGTGTCCAGGAAAATCCTGGAACACATTACTGACCAATGCCTTATATGCTGCGATGTGGGAGATCCCTGCAATGCCCGACAAGATTGCATTGACCCATCTTCACTCATTTTCCCATTTCAGGAAGATGACATTGAAAGGTGCAAAGCTTGTCAGTTGGTGTTCCATAAGCGTTGCTTTAAAAAACTTGCAAACTGTCCCTGTGGGGCTCAACTCAGATTGAATGAGACAAGGAGCTTAACTAACAGAGCAAGCCAAAGAGGAGGTGGTGAATCAAGAGGAGCTTTGAACTTGCTAGGCAGGGGACTGAGTTCTGGGTTGTCACCTAGGTTCCTCTCTGGATTATTTACGAAAGAAAAGCCAGAGAAGACTAGGCAGCATAAAGACGAAAACATTATCTTAATGGGTTCCTTACCAAGCACTATATGA 3003 0.4346 MNARGEVGSPDSLGSFPPLRVRGSDGASDDSEFERYCSANSVMGTPNTSMSLCSAVTLFQDFSDCDFASVATGEGFENFSPGKGAAPEVNRGGGDRRSFLYGSTGLEMYGDCSEELSITTLDSLEIIGFNHRIEESKGSGEVSGGNGFELEIEKREEVEEEEEEEEEELSEGDDSMYDYGSDGGNEMYLSKNIGYYEEPKVRNENSLFMNSSVAFGSRDLDDFLLQSGDISVMSDLFHNQRKKNNGVNKGSGRKEEGKDEKDMVRGNEVEETKDIGYSDAVEEVRDREISADCRRVRDSDMLANTVESSPSVDCQNCIETQVQGPESSYVGKVDEVDLDLLAKEVPRNMGLDVNDGGCMEKGNANSEEAIGTGDAHGVKLELDTSKFKFDHIGDSQFDKSYSNPSNHIGNVNTKSVESLEQIEPVLDNGMRKTLEKSFTSTNLLETSPVASKTEDFELNEFYDEVVQEMEEILLESVDSPGARLSMRNRLTEPQFSMPSRDGGLTASTSSTDDAYLLVQRQRKIDRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVERRYRDFLTLYRCMKTLFNEQGWKLPLPWSSVEKETQIFRSASPDIIVKRSVLIQDCLQSIIRSRFSSSPPRALIWFISHQDSYPISPVSHSFTRGENIRSISNLGKTISLIVEIPPNKSVKQLLESQHHTCAGCHKHFDDGKTLIWDFVQTFGWGKPRLCEYTGQLFCSSCHTNQTAVLPARVLHNWDFTYYPVSQLAKSYLDSIYEQPMLCVTAVNPFLLSKVPALLHIMSVRKKIGTMLPYVRCPFRRSINRGLGSRRYLLESNDFFALRDLIDLSRGVFAALPVMVDTVSRKILEHITDQCLICCDVGDPCNARQDCIDPSSLIFPFQEDDIERCKACQLVFHKRCFKKLANCPCGAQLRLNETRSLTNRASQRGGGESRGALNLLGRGLSSGLSPRFLSGLFTKEKPEKTRQHKDENIILMGSLPSTI* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1521 1000 MobiDBLite consensus disorder prediction 1 30 - -
Gso6g1521 1000 MobiDBLite consensus disorder prediction 241 274 - -
Gso6g1521 1000 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 43 999 - -
Gso6g1521 1000 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 43 999 - -
Gso6g1521 1000 Pfam Putative zinc-RING and/or ribbon 726 929 IPR025258 -
Gso6g1521 1000 Gene3D - 537 647 IPR036871 GO:0035091
Gso6g1521 1000 MobiDBLite consensus disorder prediction 153 178 - -
Gso6g1521 1000 ProSiteProfiles PX domain profile. 532 651 IPR001683 GO:0035091
Gso6g1521 1000 CDD PX_domain 539 626 - -
Gso6g1521 1000 Pfam PX domain 559 635 IPR001683 GO:0035091
Gso6g1521 1000 SUPERFAMILY PX domain 544 649 IPR036871 GO:0035091
Gso6g1521 1000 MobiDBLite consensus disorder prediction 154 175 - -
Gso6g1521 1000 SMART DUF4206_2 726 933 IPR025258 -
Gso6g1521 1000 Coils Coil 148 175 - -
Gso6g1521 1000 MobiDBLite consensus disorder prediction 248 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1521 Gso-Chr6 15519046 15526893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1521 - - gmx:100778899 1936.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1521 6 15519046 15526893 Gso6g1521 6 15519046 15526893 ECH
Gso4g1554 4 44963023 44972615 Gso6g1521 6 15519046 15526893 GST