Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1554 ATGAATGCGCGAGGCGAGGTCGGTTCACCGGATCCGTTGGATTCGTTCCCTCCGTTACGGGTTCGGGGATCGGACGGTGCCTCGGACGATTCCGAGTTCGAGCGGTATTGCAGCGCCAACTCGGTGATGGGGACGCCCAGCACCAGCATGAGCCTCTGCAGCGCCGTTACGCTCTTCCACGAATTCTCCGATTGCGATTTCGCTTCTGCCGGCGGCGAGGGTTTCGAGAATTTCAGTTTGGGAAAAGGAGCCGCGGAGGTGAATCGCGGCGGCGGCGGCGACCGGAGGCGGAGTTTGCGGTACGGTTCCAGTGGATTGGAGATGTACGGTGATTGCAGTGAGGAGCTCTCTATGACAGCGCTCGATTCGTCGGAGTTTATCGGGCTTAATTATCGGATCGAAGAGTCGAAAGGGAACGGTGAAGTGAGTGGTGGAAATGGTTTTGAATTGGAAATTGAGAAAAGAGAAGAAGAAGAAGTGGAAGAAGAAAAGGAGGAGGAGGAAGAAAAGGAGGAGGAGGAAGAAGAGGAGTTATCGGAGGGTGATGATTCTATGTATGACTATGGTAGTGATGGTGATGGTGGAAATGAAATGTATTTGTGGAAAAATAAAGGTTATTTTGAGGAGCCGGAAGTGAGAAACGAGAACTCTTTGTTTATGAATTCTTCCGTGGCATTTGGATCGCGAGACCTGGATGATTTTTTGTTGCAGAGTGGTGACATTTCTGTCATGCCTGATCTGTTTCAGAATCAGCGAAAAAAGAATGATGGAGTGAATATGGGTTCTGGTCGAAATGAGGAAGGGAAAGATGAAAAGTACGTGGTCAGAGGCAATGAAGTTGAAGAAACTAAAGATGTTGGTTATTTTGATTCTGTAGAGGAGGTTAGGGATAGCGAAATTTCTGCAGATTGCGATCATGTTCGAGATTCTGATATGCTTGCTAACATAGTGGAAAGTTCTCCCTCAATAGATTGTCGGAACCATGTTGAACCGCAGGTCCAAGGTTCTGATGATTTGGTTAGTTGTCCTGAAACTTCGTCTATTGTCAAGGTCGATGAAGTTGATTTGGATATGCTGGCGAAAGAAGCTCCTCCTCGGAATATGGGTTTGGATGTTAATGATGGTGGTAGCATGGAAAAGGGGAATATCAACAGTGAAGAAGCTATTGCCGCTTGTGATGCTCATGGTTTAAAGTCAGAGTTGGATGATTCTAAGTTCAATCTTGATTGCCTTAGTGCTAGCCGATTTGATAGAAGTTCTTCCATTCCATCCAACCATCTTGGGAATGTTAACGCAAAATCATTTGAGAGTCTTGAGCAAATTGAGCCAGTGTTGGACTATGGAATGAGGAAAACATTAGAGAAGTCTTCCACTTCAACAAATCTTTTAGAAAAAAGTCCTGTGGTATCTAAGGAAATGGAAGAAATTTTACTGGAATCTGTGGATTCTCCTGGGACTAGGCTTTCCATGCGTGACAGATTTGCTGAGCCTCAATTTTCTATGCCTTCAAGAGACGGTGGATTGACTGCTTCTACTTCTAGTAAAGATGATGCTTACCTGCTAGTTCAGTGCCCAAGAAAAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTAGTTGGAGTGAAGGAATACACTGTGTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAGGAGATATCGTGATTTCCTCACTCTCTATCGGTACATGAAAACCTTATTCTATGAGCAAGGCTGGAAATTACCTTTGCCATGGTCTTCAGTTGAAAAGGAAACCCAGATATTTAGAAGTGCATCGCCTGATATTATTGTGAAGAGGAGTGTTCTCATTCAAGAGTGTTTACAGTCTATTATCCGTTCCAGGTTTTCTTTAAGTCCTCCCAGAGCATTGATTTGGTTTATATCCCATCAAGATTCATATCCTATTTCACCTGTGTCAAATGCACCAGTGTCTCAGTCTTCTTTTACAAGAGGGGAAAATACCAGAAGCATTTCCAATTTAGGAAAAACAATTTCACTTATAGTTGAAATTCCACCAAACAAATCTGTGAAACAGTTGTTAGAAGCACAACATCACACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAAACTTTGATTCGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACGGGCCAGTTGTTTTGCTCTTCTTGCCACACAAATGAGACCGCAGTCTTGCCAGCCAGGGTTTTACATCATTGGGATTTCACTCACTATCCTGTTTCTCAGCTGGCAAAATCCTATCTGGATTCTATATATGAACAGCCCATGCTTTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATATTATGAGTGTCAGAAAAAAGATAGGTACAATGCTTCCATATGTTCGCTGCCCATTTCGGAGGTCTATCAACAGAGGACTTGGAAACAGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAGAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTTTATCAAGGAAAATCCTGGAACACATTACTGACCAATGCCTTATATGCTGCGATGTGGGAGACCCCTGCAATGCCCGACAAGATTGCAGTGACCCATCTTCACTCATTTTCCCATTTCAGGAAGACGACATTGAAAGGTGCAAAGCTTGTCAGTTGGTGTTCCATAAGCGTTGCTTTAAAAATCTTGCAAACTGTCCATGTGGGGCTCAACTCAGATTGAATGAGACAAGGAGCTTAACTAACAGAGCAAGCCAAAGAGGAGGAGGTGGTGAATCAAGAGGAGCTTTGAACTTGTTAGGCATGGGACTGAGTTCTGGGTTGTCACCTAGGTTCCTCTCTGGATTATTTACGAAAGAAAAGCCAGAGAAGACTAGGGAGCATAAAGACGAAAATATTATTTTGATGGGTTCCTTACCAAGTACCTCTTTATGA 3039 0.4373 MNARGEVGSPDPLDSFPPLRVRGSDGASDDSEFERYCSANSVMGTPSTSMSLCSAVTLFHEFSDCDFASAGGEGFENFSLGKGAAEVNRGGGGDRRRSLRYGSSGLEMYGDCSEELSMTALDSSEFIGLNYRIEESKGNGEVSGGNGFELEIEKREEEEVEEEKEEEEEKEEEEEEELSEGDDSMYDYGSDGDGGNEMYLWKNKGYFEEPEVRNENSLFMNSSVAFGSRDLDDFLLQSGDISVMPDLFQNQRKKNDGVNMGSGRNEEGKDEKYVVRGNEVEETKDVGYFDSVEEVRDSEISADCDHVRDSDMLANIVESSPSIDCRNHVEPQVQGSDDLVSCPETSSIVKVDEVDLDMLAKEAPPRNMGLDVNDGGSMEKGNINSEEAIAACDAHGLKSELDDSKFNLDCLSASRFDRSSSIPSNHLGNVNAKSFESLEQIEPVLDYGMRKTLEKSSTSTNLLEKSPVVSKEMEEILLESVDSPGTRLSMRDRFAEPQFSMPSRDGGLTASTSSKDDAYLLVQCPRKIDRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVERRYRDFLTLYRYMKTLFYEQGWKLPLPWSSVEKETQIFRSASPDIIVKRSVLIQECLQSIIRSRFSLSPPRALIWFISHQDSYPISPVSNAPVSQSSFTRGENTRSISNLGKTISLIVEIPPNKSVKQLLEAQHHTCAGCHKHFDDGKTLIRDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTHYPVSQLAKSYLDSIYEQPMLCVTAVNPFLLSKVPALLHIMSVRKKIGTMLPYVRCPFRRSINRGLGNRRYLLESNDFFALRDLIDLSRGVFAALPVMVETLSRKILEHITDQCLICCDVGDPCNARQDCSDPSSLIFPFQEDDIERCKACQLVFHKRCFKNLANCPCGAQLRLNETRSLTNRASQRGGGGESRGALNLLGMGLSSGLSPRFLSGLFTKEKPEKTREHKDENIILMGSLPSTSL* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1554 1012 Coils Coil 148 184 - -
Gso4g1554 1012 Gene3D - 541 646 IPR036871 GO:0035091
Gso4g1554 1012 CDD PX_domain 543 634 - -
Gso4g1554 1012 Pfam Putative zinc-RING and/or ribbon 736 939 IPR025258 -
Gso4g1554 1012 SMART DUF4206_2 736 943 IPR025258 -
Gso4g1554 1012 MobiDBLite consensus disorder prediction 138 193 - -
Gso4g1554 1012 MobiDBLite consensus disorder prediction 154 187 - -
Gso4g1554 1012 SUPERFAMILY PX domain 548 653 IPR036871 GO:0035091
Gso4g1554 1012 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 43 1012 - -
Gso4g1554 1012 MobiDBLite consensus disorder prediction 1 31 - -
Gso4g1554 1012 Pfam PX domain 563 650 IPR001683 GO:0035091
Gso4g1554 1012 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 43 1012 - -
Gso4g1554 1012 ProSiteProfiles PX domain profile. 536 655 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1554 Gso-Chr4 44963023 44972615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1554 - - gmx:100800081 1929.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1554 4 44963023 44972615 Gso6g1521 6 15519046 15526893 GST