Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1490 ATGGTCTCTTCTAATGGACTAGCTACGAGTCAGCCACTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGACATTCCTGATGGCCGTTCATTCCTTGGTGTTCCACGGTATTATAGACACAGTCTTCTCATATTGCAGAGAGCAGTTAAAGAATGGAACTCTCATCAGAGGCACAAGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGATACTGTAAAGAAAGTTGTTGATGAATTTGAGATGTTCACAGGAGGACCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTTCCTCGCAGCAAGTTACTTTCATTACTGAAGATCCATACTCTTGATGGCCGCGCATACTATGATTTCTCGCCAGTGCCTGAATATAGATTTGTTGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAAAACACTGGAGGCCTTGAAAATCCTAAGGGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAATTTGGAGGGTCCTGAACGAAGGTTTGTAATGTTTAATGGAGCTGTTGGAAAGGAACAGGTCGAATGGTTAGATGGTGTTCTCTTGGAGTCAACAAACTTGAAACAGAAGGTGGTTGTCTGCTGCCATCTGCCTCTACATCCTGGTGCGGCAACTGAAGAGACACTGTTGTGGAATTACGATGAAGTAATGAATTTGATACACAGATACAATTGCGTTAAGGTCTGTCTTGCAGGGCATGATCATAAAGGCGGATACTCTATTGATTCTCATGGGATACACCATAGAGTTTTTGAAGCTGCTTTGGAATGCCCTCCTGGTACGGATGCATTTGGATACATTGATGTCTATGATGACAGGATATCACTTGTTGGAACTGACAGAATGAAAAGTACAGAGATGGATTTTACTCCCCCAAGTTAA 963 0.4133 MVSSNGLATSQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSLLILQRAVKEWNSHQRHKFVINFGDIVDGFCPKDQSLDTVKKVVDEFEMFTGGPVYHMIGNHCLYNLPRSKLLSLLKIHTLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEALKILREKNPNEDKNSPTNLEGPERRFVMFNGAVGKEQVEWLDGVLLESTNLKQKVVVCCHLPLHPGAATEETLLWNYDEVMNLIHRYNCVKVCLAGHDHKGGYSIDSHGIHHRVFEAALECPPGTDAFGYIDVYDDRISLVGTDRMKSTEMDFTPPS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1490 320 PANTHER - 1 320 - -
Gso6g1490 320 Gene3D - 9 309 IPR029052 -
Gso6g1490 320 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 320 - -
Gso6g1490 320 Pfam Calcineurin-like phosphoesterase 15 263 IPR004843 GO:0016787
Gso6g1490 320 SUPERFAMILY Metallo-dependent phosphatases 12 311 IPR029052 -
Gso6g1490 320 CDD MPP_Nbla03831 14 303 IPR041869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1490 Gso-Chr6 14997166 14999690 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1490 K01517 - gmx:100792911 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1490 6 14997166 14999690 Gso6g1490 6 14997166 14999690 ECH
Gso6g1490 6 14997166 14999690 Gso5g0357 5 3721653 3724181 PCT
Gso6g1490 6 14997166 14999690 Gso17g1054 17 9979277 9981960 PCT