Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1054 ATGGGTTCTGCTAACGGACTAACTGCTATAAATGGGAAACAACCTCTCTTTTCTTTTGGGTTGATATCCGATGTGCAATATGCTGACATTCCTGATGGTAGGTCATTCCTTGGTGTTCCACGGTACTATAGGCATAGCATTGTAGTGTTACAGAGAGCAGTAAAAGAATGGAATACTAGTAAGAGGCACAAGTTTGTGATAAATTTTGGGGATATTGTTGATGGGTTTTGTCCAAAAGATCAATCTCTTAGCACTGTAAAGAAACTTGTGGATGAATTTGAGATGTTCAACGGACCAGTGTACCATTTGATTGGCAATCACTGCCTATACAATCTGCCTCGAAGTAAGTTACTTCCATTGTTGAAGATCAAGAGTTTTGAAAGCCATGCTTACTATGATTTTTCACCAGTGCCTGAATATAGATTTGTAGTTCTTGATGGCTATGACATAAGTGCGATTGGCTGGCCTCAGGATCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAGAAGAATCCAAATGAAGACAAGAACAGTCCAACAGGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTTAATGGAGCTATTGGAAAGGAACAAATGGAATGGTTGAATAATGTTCTTCAAGAAGCAACAAAATTGAAACAGAAGGTGGTGGTGTGTTGCCATCTCCCTCTAGATCCTGGTGCATCATCTAAGGAGGCACTGTTATGGAATTATGCTGAAGTAATGAATTTGATACACAAATACACTTGTGTGAAGCTTTGTCTATCTGGACATGATCACAAAGGTGGATACTCCATTGATTCCCATGGAGTTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTACTGGAACGGATGCATTTGGATATGCTGATGTTTATGATGATAGAGTATCACTTTATGGTACTGACAGAATGCAGAGTACAGACATGTATTTTCATCCTAAAGCAGATTTGTGA 975 0.4 MGSANGLTAINGKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSIVVLQRAVKEWNTSKRHKFVINFGDIVDGFCPKDQSLSTVKKLVDEFEMFNGPVYHLIGNHCLYNLPRSKLLPLLKIKSFESHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNEDKNSPTGLVGLERRFLMFNGAIGKEQMEWLNNVLQEATKLKQKVVVCCHLPLDPGASSKEALLWNYAEVMNLIHKYTCVKLCLSGHDHKGGYSIDSHGVHHRVLEAALECPTGTDAFGYADVYDDRVSLYGTDRMQSTDMYFHPKADL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1054 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Gso17g1054 324 PANTHER - 3 321 - -
Gso17g1054 324 SUPERFAMILY Metallo-dependent phosphatases 15 314 IPR029052 -
Gso17g1054 324 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 3 321 - -
Gso17g1054 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Gso17g1054 324 Gene3D - 12 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1054 Gso-Chr17 9979277 9981960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1054 K01517 - gmx:100808714 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0357 5 3721653 3724181 Gso17g1054 17 9979277 9981960 GST
Gso17g1054 17 9979277 9981960 Gso6g1489 6 14991584 14995031 PCT
Gso6g1490 6 14997166 14999690 Gso17g1054 17 9979277 9981960 PCT