Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1481 ATGACGATCACCGCGGCGCCGACGGTGAAGGACAGGTGCCTTGAGGTGAGGGGCAAGGTGATTTTGACCCATGTCACCGGAAACATTGTTGTTTCTCCGGTGGTTGGAACAGAGTCTGCTTTCTTGGGTGCAACTTCAACCGTTTCAAGTTCACGTCATGTTTTTGATCTTGGAATACTCCAATGTTCCAATGGAAACTCAATTGCTGCTCCTGAAGAAAGAGAAGAGTCTGCGCTTGAGGATGAGTTTTCTTCTGACTCTGAAGAGCCAACTACAGAGAACACTTGCTACATTCTCCTTTTGCCTGTTTTGGATGGACAGTTTCGCACAACTTTGCAGGGAACTCAATCAAATGAGCTCCAGCTCTGCATTGAAAGAGATGCTTATGTTCAAGCTTCCCAATCACTAGAAGCAGCATTTGTGAATTCAGGGGACAATCCATTTGAGTTGATCGGGGACTCTATCAAAATATTGGAGAAACACAAAGGGACTTTCTGTCATCTTGAAAACAAGAGGATTCCTGCACATCTTGACTGGTTTGGATGGAGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCACAAGGAATAAAAGAGGGCCTTCAGAGTTTCTTAAATGAAGGTTGTTCGCCAAAGTTCATCATCATTGATGATGGATGGCAAGAGACCCTCAACACGTTTCGCAAAGAAGGTGAATCAGTGATTGAGGGAACCCAGTTTGCAACCAGACTGATAGACATTAAAGAAAACAAAAAGTTCACCAATGCAGGCTCCGAAAATTCTTGTAACAATCTCCACGATTTTGTTGATTCCATCAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATACTTTAACTGGTTACTGGGGAGGTGTACTCCCATCATCAGATGCATTGAAAAAATATAATCCAAAGATTTTATATCCAATTCAGTCACCTGGAACCACAGGGAACCTTAGAGATGTAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATTGACCCAGAAAAACTATATGACTTTTACAATGATTCCCACAGTTACCTTGCAAGCTGTGGTGTAGATGGAGTCAAAGTAGATGTCCAAATTTGA 1104 0.4239 MTITAAPTVKDRCLEVRGKVILTHVTGNIVVSPVVGTESAFLGATSTVSSSRHVFDLGILQCSNGNSIAAPEEREESALEDEFSSDSEEPTTENTCYILLLPVLDGQFRTTLQGTQSNELQLCIERDAYVQASQSLEAAFVNSGDNPFELIGDSIKILEKHKGTFCHLENKRIPAHLDWFGWSTWDAFYTEVSPQGIKEGLQSFLNEGCSPKFIIIDDGWQETLNTFRKEGESVIEGTQFATRLIDIKENKKFTNAGSENSCNNLHDFVDSIKQNMNVKYVYMWHTLTGYWGGVLPSSDALKKYNPKILYPIQSPGTTGNLRDVAMDSLEKYGVGIIDPEKLYDFYNDSHSYLASCGVDGVKVDVQI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1481 367 Pfam Raffinose synthase or seed imbibition protein Sip1 85 366 IPR008811 -
Gso6g1481 367 SUPERFAMILY (Trans)glycosidases 175 365 IPR017853 -
Gso6g1481 367 Gene3D Aldolase class I 175 366 IPR013785 -
Gso6g1481 367 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 88 366 - -
Gso6g1481 367 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 61 - -
Gso6g1481 367 MobiDBLite consensus disorder prediction 70 90 - -
Gso6g1481 367 PANTHER - 88 366 IPR008811 -
Gso6g1481 367 PANTHER - 1 61 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1481 Gso-Chr6 14915849 14918812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1481 1 366 Glycoside Hydrolase AT3G57520 45.995 3.44e-116 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1481 - - gsj:114415850 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1481 6 14915849 14918812 Gso6g1481 6 14915849 14918812 ECH
Gso4g1600 4 45656394 45660434 Gso6g1481 6 14915849 14918812 GST