Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1600 ATGATGATCACGGCGGCGCCGACTGTGAATGACGAGTGCCTTACGGTGAGGGGCAGGGCGGTTTTGACCCATGTCCCCGGAAACATTGTTGTTTCTCCGGTTGGAACAGAGTCCGCTTTCTTGGGTGCAACTTCAAGCATTTCAAGTTCACGTCATGTTTTTGTTCTTGGAATTCTTCAGGGATATAAGTTGCTATCTTTGTTCAGAGTTAAAATCTGGTGGATGATACCACGTATAGGGAGATCTGCAAGTGATGTTCCAATGGAAACTCAATTTCTGCTCCTTGAAGCAAGAGAAGAGTCTGCCCTTGAGGATGAATTTTCTTCTGACTCTGAAGAGCCAACTACAGAGAACACTTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCGCAACTTTGCAGGGAACTCAAGCAAATGAGCTCCAGTTCTGCATTGAAAGTGGAGATGCTCATGTTCAAACTTCCCAATCACTAGAAGCAGTATTTGTAAATTCAGGGGACAATCCATTTGAGTTAATCAGGGATTCTATCAAGATGTTGGAGAAACACAAAGGAACTTTCTGTCGTCTTGAAAACAAGAGGATTCCTGCACATCTTGACTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCAAATGGAATAAGAGAGGGCCTTCAGAGTTTCTCAAATGGAGGTTGTTCACCGAAGTTTATCATCATTGATGATGGATGGCAAGAGACCCTGAACACTTTTCACAAAGAAGGTGAACCAGTGATTGAGGGAACCCAGTTTGCAACCAGACTGATAGACATTAAAGAAAACAAAAAGTTCACCGATGCAGGCTCCTACAATTCTTGCGACAATCTCCACAATTTTGTTGATTCCATTAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGTTTACTTCCATCATCAGATACAATGAAGAAATATAATCCAAAGATTGTATATCCAATTCAGTCACCTGGTACCACAGGGAACCTTAGAGATATAGCCATGGATAGCTTGGAAAAATATGGAGTGGGAGTCATTGACCCAGAAAAACTATATGACTTTTACAATGATTACCACAGTTACCTTGCCAGTTGTGGTGTGGATGGAGTCAAAGTAGATGTCCAAAATTTGATAGAAACGTTGGGTTCTGGGTACGGTGGTCGCGTTTCGTTGAGCAAACGGTATCAAGAAGCACTAGAGCAATCTGTAACAAGGAACTTTAAGGACAACAATCTGATTTGTTGCATGTGTCACAACTCTGATTCAATTTACAGCTCAAAGAATAGTGCAGCAGTAAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATTGCAGACCTTACACATCGCCTCTGTCGCGTTTAACAGTCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCATAGCAAGCATGAGACAGCCGAGTTCCATGCTGCAGCAAGAGCAGTAGGTGGATGTGCAGTATATGTCAGTGACAAGCCTGGAAATCATGATTTTAAAATCCTCGAGAAGCTAGTGCTGGCTGATGGATCAGTCTTGAGAGCAAGATATGCCGGCCGCCCTACTCGAGATTGTTTATTTGAAGACCCTGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAATTTGAATGTTCTGACCGGGGTGGTAGGCGTCTTCAATTGCCAAGGAGCAGGATGCTGGCCACTGAAATCATTGGAAGCCGCACCCTTGCGCATAACCATTTCAGGGAAAGTGAGACCCCTTGATGTTGAATTTCTTGAAGAGGTTGCAGGTGAAAATTGGAATGGAGACTGCATAGTATATGCCTTCAATGCAGGCTTGCTTTCCAACATATCTTGCAGAGGAAAACTTGAAGTGTCCCTGGAGACTCTCCATTGTGAAATATATACAGTATCTCCAATAAGGGTGTTTGGTCATGATGTGCTATTCGCACCAATAGGATTGCTTGACATGTACAATTCAGGAGGAGCAGTAGAAGCCTTGGACTGCACCATGGATGTTGCACAATGCATAATCAAAATCAAAGGCAGAGGATGTGGTCGTTTTGGAGCCTACTCCAACGTTAGACCGAAACTTTGTGTAGTGGACATGAAGGAGGAAGAGTTCTTCTACAACCGTGAAGATGGATTATTGACTATTACACTTGCTGGTGAAGGCAACTCAAAGGACATAGAATTTGTATACTGA 2250 0.4311 MMITAAPTVNDECLTVRGRAVLTHVPGNIVVSPVGTESAFLGATSSISSSRHVFVLGILQGYKLLSLFRVKIWWMIPRIGRSASDVPMETQFLLLEAREESALEDEFSSDSEEPTTENTCYILFLPVLDGQFRATLQGTQANELQFCIESGDAHVQTSQSLEAVFVNSGDNPFELIRDSIKMLEKHKGTFCRLENKRIPAHLDWFGWCTWDAFYTEVSPNGIREGLQSFSNGGCSPKFIIIDDGWQETLNTFHKEGEPVIEGTQFATRLIDIKENKKFTDAGSYNSCDNLHNFVDSIKQNMNVKYVYMWHALAGYWGGLLPSSDTMKKYNPKIVYPIQSPGTTGNLRDIAMDSLEKYGVGVIDPEKLYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLSKRYQEALEQSVTRNFKDNNLICCMCHNSDSIYSSKNSAAVRASEDFMPREPTLQTLHIASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAVGGCAVYVSDKPGNHDFKILEKLVLADGSVLRARYAGRPTRDCLFEDPVMDGKSLLKIWNLNVLTGVVGVFNCQGAGCWPLKSLEAAPLRITISGKVRPLDVEFLEEVAGENWNGDCIVYAFNAGLLSNISCRGKLEVSLETLHCEIYTVSPIRVFGHDVLFAPIGLLDMYNSGGAVEALDCTMDVAQCIIKIKGRGCGRFGAYSNVRPKLCVVDMKEEEFFYNREDGLLTITLAGEGNSKDIEFVY* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1600 749 SUPERFAMILY (Trans)glycosidases 200 525 IPR017853 -
Gso4g1600 749 Gene3D Aldolase class I 200 526 IPR013785 -
Gso4g1600 749 Pfam Raffinose synthase or seed imbibition protein Sip1 9 735 IPR008811 -
Gso4g1600 749 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 749 - -
Gso4g1600 749 PANTHER - 1 749 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1600 Gso-Chr4 45656394 45660434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1600 1 737 Glycoside Hydrolase AT1G55740 48.400 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1600 - - gmx:100816978 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1600 4 45656394 45660434 Gso6g1481 6 14915849 14918812 GST