Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1478 ATGAGTAACCACACTCGCGCGCTACCACCAGCAGCTACCCCTAAGATGCAGCAAAGGAAGGAGCGACAAAGGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACTCATGCCCCTGATGGTCGTGAAATTGATGTCAAACCCATTCTCCAAATTGTGGATGAAATCTTGGTTCGGTTCATCGCTCGCACTGTTGAGGGTTACGAAGTAAAGCGAGATCAAGATGCATTGGAGATGACAGCTGCTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTATATCATAAACAAAATTTCGTGCGAGCTATCATGCAAGTGCTCGGGAGGTGGAGATGCACATTCCTCAACAATGGTGTTACTGAATTACATCTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCCTTTGCCGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAACACGCTTGCCAAGTCTGTGGCCCTCCTTAAGCAACTGCCTGACATTGCTGAGAATTTCATGTCCATGAAACCTCATTTTGAAGCACTCATTAGGCTCGTGAAGGCGGCGATGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCATCTGAATACATCTCTGAGGATACTCCTCCTATGTCTGTTGCAAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTTCCTCACAAATTTCTAGTTTCATAGGCATGAGAAATGAGTCCATTTCATCAACCACAGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTTAGTAGTATATATGAGCACCTCAAGAACCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCATAATCTGATACGTCTTTTCGAGACAGTCCATGTAGACAACATGAAAATTCTCAGAGCACTGATATATGCAAAGGATGATGTTCTTCCACTTGTAGATGGAACTGCAAAATCAAGGGTTAGTCTCGAGGTACTAAGGAGGAAACATGTGTTGCTGCTAATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGACAATTTGTACAAGGATGCGCGAGCAAGGGGCGACACGCAATACGAGATGGTATGGATCCCAATTGTGGACAAAGCAACCTGGAATGACATGAGCAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGTACAGTGTCTATGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGAAAGCTATTCTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCTGTGCACATGATATGGATTTGGGGAAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGACAGAAGGCAAACTGATATGCCTGTATGGAGGAGAAGACCTGGAATGGATTGAAAAATTCACAGCCACTGCAATAAGCGTTGCAAAAGCAGGCAAGTTCGAGCTAGAGATGGCGTACGCGGGGAAGAGCAACGCGAAGGAGCGTATGCAGAAGATGATCAAGACATTCACCACAAGAAAGTTCAGCTACTTCTGGCCAAACGTGACATCGATATGGTTCTTCTGGACGAGGCTGGAGAGCATGCTGTACTCGAAGCTGCTGCACGGGAGGACGGTGGAGAAGGACGAGATCATGAGCGAAGTCATGACGGTCCTAAGCTTTGACGGCAGCGACCGAGGGTGGGCGATCTTCTGCAGAGGCGCCACCGAGATGGCCAGAGCCAAGGGTGACAGTGCTCTCAGATGCTTGCAGGATTTTGATAAGTGGAAGGGAAGAATTGAGGAAGACGGTGTGGTGCATGCAATCAATGATTATCTCAACAAAAACAAACCACCGCATCACTGCAATCGCTTGATACTTCCCGGGAGCACTGGTGGCATACCACAGAAGGTTGTTTGTGCTGAGTGTGGACGCCAAATGGAGAAGTACTTCATGTATCGTTGTTGTGTGGAGTAA 2118 0.4585 MSNHTRALPPAATPKMQQRKERQRFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYISSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSMKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACSSQISSFIGMRNESISSTTEAWELSSLAHKVSSIYEHLKNQLVLCYQYIDDKRHIEAFHNLIRLFETVHVDNMKILRALIYAKDDVLPLVDGTAKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTQYEMVWIPIVDKATWNDMSKQKFEYLQSLMAWYSVYDPFIIEPSAVKYIKEVWNFSKKAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDLEWIEKFTATAISVAKAGKFELEMAYAGKSNAKERMQKMIKTFTTRKFSYFWPNVTSIWFFWTRLESMLYSKLLHGRTVEKDEIMSEVMTVLSFDGSDRGWAIFCRGATEMARAKGDSALRCLQDFDKWKGRIEEDGVVHAINDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1478 705 Pfam Sieve element occlusion N-terminus 28 312 IPR027942 -
Gso6g1478 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 - -
Gso6g1478 705 Pfam Sieve element occlusion C-terminus 474 703 IPR027944 -
Gso6g1478 705 MobiDBLite consensus disorder prediction 1 42 - -
Gso6g1478 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1478 Gso-Chr6 14891585 14898099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1478 - - gmx:100789215 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1478 6 14891585 14898099 Gso6g1478 6 14891585 14898099 ECH
Gso4g1604 4 45683408 45688721 Gso6g1478 6 14891585 14898099 GST