Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1604 ATGAGCAACCCTAAGATGCAGCAAAGGAGGGAGCGACGCATGTTCTCCACCTCTGATGACAGTGCCATGACCAAGCAAGTTGAGGCCACTCATGCCCCTGATGGTCGTGAAATTGATGTCAAACCCATTCTCCAAATTGTGGATGAAATCTTGGTTCGGTTCATTGCTCGCACCGTTGAGGGTCATGAAGTAAAGCGAGATCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTATATCATAAACAAAATTTCCTGCGAGCTATCATGCAAGTGCTCGGGAGGGGGAGATGCACATTCATCAACTATGGTGCTACTGAATTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGTTAACCTTAGCTGCCTTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAACACACTTGCCAAGTCTGTGGCCCTACTTAAGCAACTACCTGACATTGCTGAGAATTTCATGTCCCTGAAGCCCCATTTTGAGGCACTCATTAGGCTCGTGAAGGCGGCAATGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCATCTGAATACATTTCAGAGGATACTCCTCCCATGTCTGTTGCAAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTTCCTCACAAATTGCTAGTCTCGTAGGCATGAGAAATGAATCCATTTCATCAACCACAGAGGCATGGGAATTATCTAGTCTGGCTCACAAAGTTAGCAGTATATATGAGCACCTCAAGAACCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCATAATCTGATACGTCTTTTCGAGACAGTTCATGTAGACAACATGAAAATTCTCAGAGCACTGATATATGCAAAGGATGATGTTCTTCCACTTGTAGATGGAACTACAAAATCAAGGGTTAGTCTCGAGGTACTAAGGAGAAAACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCCCGAGCGAGGGGTGATACGCACTATGAGATGGTATGGATCCCAGTTGTGGACAAAGCAACCTGGAATGAGACGAGCAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGTACAGTGTCTATGATCCTTTCATCATTGAACCATCAGCAATTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACAGCTATTCTAGTGGCCCTTGATCCACAAGGCAAATTGTCCTCCCCTAATGTTGTCCATATGTTATGGATTTGGGGAAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGACAGATGGAAAACTCATATGCCTGTATGGAGGCGAAGACCTGGAGTGGATTGAAAAATTCACAACCACAGCAATAAGTGTTGCAAAAGCTGGCAAGTTCGAGCTAGAGATGGCGTACGTGGGAAAGAGCAACGCGAAGGAGCGTATGCAGAAGATGATCAAGACCTTCACCACAAGAAAGTTCAGTTACTTCTGGCCCAACGTGACATCCATATGGTTCTTCTGGACGAGGCTAGAGAGCATGCTGTACTCCAAGCTGCAGCACGGGAGGACGGTAGAGAACGATGACATCATGAGCCAAGTCATGACCGTGCTCAGCTTCGATGGCAGCGATCGAGGCTGGGCGATCTTCTGCAGAGGCGCCACCGAGATGGCCAGAGCCAAGGGTGACAGTGCTCTGATATGCTTGCAGGACTTTGATAAGTGGAAGGACAGAATTGAGGAAGATGGTGTGGTGCAAGCAATGAATGATTATCTCAACAAAAACAAACCACCACATCACTGCAATCGCTTGATCCTTCCTGGTAGCACTGGTGGCATACCGCAGAAGGTTGTTTGTGCTGAGTGTGGACGCCAAATGGAGAAGTACTTCATGTATCGCTGTTGTGTGGAGTAA 2088 0.4526 MSNPKMQQRRERRMFSTSDDSAMTKQVEATHAPDGREIDVKPILQIVDEILVRFIARTVEGHEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACSSQIASLVGMRNESISSTTEAWELSSLAHKVSSIYEHLKNQLVLCYQYIDDKRHIEAFHNLIRLFETVHVDNMKILRALIYAKDDVLPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPVVDKATWNETSKQKFEYLQSLMAWYSVYDPFIIEPSAIKYIKEVWNFSKTAILVALDPQGKLSSPNVVHMLWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTDGKLICLYGGEDLEWIEKFTTTAISVAKAGKFELEMAYVGKSNAKERMQKMIKTFTTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGRTVENDDIMSQVMTVLSFDGSDRGWAIFCRGATEMARAKGDSALICLQDFDKWKDRIEEDGVVQAMNDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1604 695 Pfam Sieve element occlusion C-terminus 464 693 IPR027944 -
Gso4g1604 695 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 5 694 IPR039299 GO:0010088
Gso4g1604 695 MobiDBLite consensus disorder prediction 1 31 - -
Gso4g1604 695 MobiDBLite consensus disorder prediction 1 18 - -
Gso4g1604 695 Pfam Sieve element occlusion N-terminus 18 302 IPR027942 -
Gso4g1604 695 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 5 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1604 Gso-Chr4 45683408 45688721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1604 - - gmx:100811452 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1604 4 45683408 45688721 Gso6g1478 6 14891585 14898099 GST