Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1469 ATGGCAGCTGCAAGTAGCATCATCTCCATCTCCTCTGCTTCACTCTTTACTCCAACAACAACCCAATGCCTCCTCAAACACAATTACAAGGACCATGATCATGTTCATGTTCCATCATCATCATCATCATACTTCACAACACACGCTGCTCTCAAGATATCAAGACCAACAACAACAACGTTTGGAATCACCACAACAACCACCAGGGTTAATAATGTTCCTCCTCGTAGGTTTAGTTGTTCAGCATCGTCATCTTCTTCCTCTTCCACTCTTCCCTCAGCTCTTCTATTTGACTGTGATGGAGTCCTTGTGGATACTGAGAAAGATGGTCACCGCATATCTTTCAACCAAACCTTCCAAGAGAGAGAACTAGGCGTTACATGGGATGTGGACTTGTACGGGGAATTGCTCAAAATTGGAGGCGGAAAAGAAAGGATGACAGCGTACTTTAACAAGGTCGGTTGGCCTGCGAATGCCCCAACAGATGAACAAGAAAGAAAAGAATTCATAGCTTCACTCCACAAACAAAAGACAGAACTATTTATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGACCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCTGAGAGAGCAGAAAAAATCAAGATATTTGCCGGAGACGTGGTTCCCCGTAAAAAGCCTGATCCAGCTATCTACCTATTAGCAGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGCAGCTGGAATGACGTGTATAGTAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTCTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCTTTCTGCGGAAGCCTTCTTGAGAAGCAATACGTGAGCTAG 1008 0.4504 MAAASSIISISSASLFTPTTTQCLLKHNYKDHDHVHVPSSSSSYFTTHAALKISRPTTTTFGITTTTTRVNNVPPRRFSCSASSSSSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPANAPTDEQERKEFIASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1469 335 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 173 291 IPR006439 -
Gso6g1469 335 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 90 318 - -
Gso6g1469 335 CDD HAD_CbbY-like 94 294 - -
Gso6g1469 335 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 59 334 IPR044999 GO:0016787
Gso6g1469 335 PANTHER CBBY-LIKE PROTEIN 59 334 - -
Gso6g1469 335 SUPERFAMILY HAD-like 93 314 IPR036412 -
Gso6g1469 335 Gene3D - 94 311 IPR023214 -
Gso6g1469 335 Gene3D Putative phosphatase; domain 2 106 190 IPR023198 -
Gso6g1469 335 SFLD phosphoglycolate phosphatase 90 318 - -
Gso6g1469 335 Pfam Haloacid dehalogenase-like hydrolase 95 291 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1469 Gso-Chr6 14775120 14780391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1469 - - gmx:100786021 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1469 6 14775120 14780391 Gso6g1469 6 14775120 14780391 ECH
Gso4g1616 4 45846900 45852048 Gso6g1469 6 14775120 14780391 GST