Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1616 ATGGCAGCTTCAAGTAGCATCATCTCCATCTCCTCTGCTTCACTCTTCACTCCAAAAATCCAATGCCTCCCCAAACACAACAAGGACCATGATCATGTTCCAATTCCATCATCATCATCCTTCACAACACATGCTTCTCTCAAGATATCAAGACCAACAACAACGTTTGGAATCACCACAACAACCACAAGGCTTAATGTTCCTCCTCGTAGGTTGAGTTGTTCAGCATCAGCTTCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGTGATGGAGTCCTTGTGGATACTGAGAAAGATGGCCATCGCATATCTTTCAACCAAACCTTCCAAGAGAGAGAACTAGGTGTTACCTGGGATGTGGACTTGTACGGGGAATTGCTGAAAATTGGAGGCGGAAAAGAAAGGATGACAGCATACTTTAACAAGGTGGGTTGGCCTGCGAATGCCCCAACAGGTGAACAAGAAAGAAAAGAATTCATAGCTTCACTCCACAAACAAAAGACAGAACTATTTATGGCCCTTATAGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAACGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCTGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGACGTGGTTCCCCGTAAAAAGCCTGATCCTGCCATCTACCTATTAGCAGCCAGCACTCTGAATGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCTTAGCAGCTGCTAAAGCAGCTGGAATGACGTGTATAGTAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTCTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGACTTGGCATTCTGTGGAAGCCTTCTTGAGAAGCAATACGTGAGCTAG 987 0.4509 MAASSSIISISSASLFTPKIQCLPKHNKDHDHVPIPSSSSFTTHASLKISRPTTTFGITTTTTRLNVPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPANAPTGEQERKEFIASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLNVEPSRCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1616 328 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 83 311 - -
Gso4g1616 328 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 55 327 IPR044999 GO:0016787
Gso4g1616 328 Gene3D Putative phosphatase; domain 2 99 183 IPR023198 -
Gso4g1616 328 Gene3D - 87 304 IPR023214 -
Gso4g1616 328 SFLD phosphoglycolate phosphatase 83 311 - -
Gso4g1616 328 SUPERFAMILY HAD-like 86 307 IPR036412 -
Gso4g1616 328 CDD HAD_CbbY-like 90 287 - -
Gso4g1616 328 Pfam Haloacid dehalogenase-like hydrolase 88 284 IPR041492 -
Gso4g1616 328 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 167 284 IPR006439 -
Gso4g1616 328 PANTHER CBBY-LIKE PROTEIN 55 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1616 Gso-Chr4 45846900 45852048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1616 - - gmx:100816266 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1616 4 45846900 45852048 Gso6g1469 6 14775120 14780391 GST