Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1462 ATGGGGAAGAAGACGAAGAAACCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCGAGAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCTAAGAAGAAGGATGTCCAAGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCACTGTCAATCCATTGAAGGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGAAACAAGACATTCGTGTATGGCGATCTCTTCCGGTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCCAGTCCTAACAGTCCTCCTCCTCGCAGTGCTCATCAAGCCGTTGCATGGAAGAATTATGTTTATATTTTTGGTGGTGAGTTTACATCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGTTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGCAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGACATTTTTTTGTATGGTGGCTATTCGAAAGAAGTTTCATCTGATAAGAGCAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAGTCTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGTCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGTTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACTAAAGATAAGTTAAAAAAAATAGAACAAAATTGTCCTGATGATGTTGACAAGAAGATAAATCCAGCATGTGCAACAAGAGAAGAAACTGAGGAGTCAGATGATGAAGAAAACAGCATTGATTATATATCCAAGAATATAGCGTCAAACATGTCTATTGATGATGGTGAAACACTTACCAAATCCGAAGGAAAGCCTAAGGAATCCAGTGCTAAATTGGACCTTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCCTGCATGGCCGTTGGAAGAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCGTCAGAATCTGAATGGGTGGAAGCTTCAGATGATGATGAAGAAAATGAAGATGATGATGAAGATGAATCTGACAGTGATGGTTCAACTGATGAGGATGAAGATGATGAGGAAGAGGAGGAGGAAGAGGCTCAGAATGCATCAGTTCAGGTGGTAGATGCCGTTGCTTTAATCAAAGGGGTGGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCCTTGAGGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAAGCCTATTCTTGACGAGCTAGCTCTATTAGAAGCTGAGCAGAAAGCGGAGGAGGCCGAAGCACCAGAAACTAGTGCAAAGAAAAGAGGAAAGAAAAAAACTAGAAATTGA 1986 0.4275 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKDVQVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLFRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPAAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKSNSEKGIVHSDMWSLDPKSWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEVDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCPDDVDKKINPACATREETEESDDEENSIDYISKNIASNMSIDDGETLTKSEGKPKESSAKLDLQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENEDDDEDESDSDGSTDEDEDDEEEEEEEAQNASVQVVDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEAPETSAKKRGKKKTRN* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1462 661 MobiDBLite consensus disorder prediction 491 537 - -
Gso6g1462 661 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Gso6g1462 661 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g1462 661 Gene3D - 42 367 IPR015915 GO:0005515
Gso6g1462 661 Coils Coil 12 32 - -
Gso6g1462 661 MobiDBLite consensus disorder prediction 407 429 - -
Gso6g1462 661 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 654 - -
Gso6g1462 661 MobiDBLite consensus disorder prediction 640 661 - -
Gso6g1462 661 Pfam Kelch motif 236 290 IPR011498 GO:0005515
Gso6g1462 661 Pfam Domain of unknown function (DUF4110) 570 655 IPR025183 -
Gso6g1462 661 Pfam Galactose oxidase, central domain 68 122 - -
Gso6g1462 661 Pfam Galactose oxidase, central domain 446 488 - -
Gso6g1462 661 MobiDBLite consensus disorder prediction 12 35 - -
Gso6g1462 661 Pfam Galactose oxidase, central domain 135 187 - -
Gso6g1462 661 MobiDBLite consensus disorder prediction 494 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1462 Gso-Chr6 14600689 14619012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1462 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 27.731 4.08e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1462 - - gmx:100807766 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1462 6 14600689 14619012 Gso6g1462 6 14600689 14619012 ECH
Gso4g1625 4 46023223 46031870 Gso6g1462 6 14600689 14619012 GST