Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1625 ATGGGGAAGAAGACGAAGAAACCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCGAGAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCTAAGAAGAAGGAGGTTCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCCCTCACCGTCAATCCATTGAAGGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGGAACAAGACATTTGTGTACGGCGATCTCTACCGGTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCAAGTCCGAATAGTCCTCCTCCTCGCAGTGCTCATCAAGCCGTTGCGTGGAAGAATTATGTTTATATTTTTGGTGGTGAGTTTACGTCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGTTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGACATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAGCAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAAACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGTCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGAAGGGCTCTGCTATTTGGTGGTGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGATTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACTAAAGATAAGATAAATCCAGCATGTACAACAAGAGAAGAAACTGAGGAGTCAGAGGATGAAGAAAACAACATCGACGATATATCCAAGAATATAGCATCAAACATGTCTATCGATGATGGTGAAACACTTACCAAATCCGAAGGAAAGGCCGAGGAATCCAGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCTTGCATGGCCGTTGGAAGAGATACATTATACATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAATGCATTATACCGGCATCTGAATCTGAATGGGTGGAAGCTTCAGATGATGATGAAGAAAATGAAGATGATGATGAAGATGAATCCGATGGTGATAGTCTGACTGATGAGGATGAAGATGACGAGGAAGAGGAGGAGGAAGAGGCTCAGAATGCATCCGTTCAGGTGGGAGATGCCGTTGCTTTAATCAAAGGGGTGGGAAAGAATTTGCGGAGGAAAGAAAGGAGGGTACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCAGATTCACAGAGAACACCCTCGCCAGGAGAATCCTTGAAGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAAACCTATTCTTGATGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCAGAGGAGGCCGAAGGACCAGAAACTAGTGCAAAGAAAAGAGGAAAGAAGAAAACTAGAAATTGA 1941 0.4333 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKSNSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKINPACTTREETEESEDEENNIDDISKNIASNMSIDDGETLTKSEGKAEESSAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENEDDDEDESDGDSLTDEDEDDEEEEEEEAQNASVQVGDAVALIKGVGKNLRRKERRVRIEQIRASLGLSDSQRTPSPGESLKDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSAKKRGKKKTRN* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1625 646 MobiDBLite consensus disorder prediction 1 35 - -
Gso4g1625 646 Coils Coil 12 32 - -
Gso4g1625 646 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 639 - -
Gso4g1625 646 MobiDBLite consensus disorder prediction 357 412 - -
Gso4g1625 646 SUPERFAMILY Kelch motif 82 470 IPR015915 GO:0005515
Gso4g1625 646 Pfam Domain of unknown function (DUF4110) 555 640 IPR025183 -
Gso4g1625 646 MobiDBLite consensus disorder prediction 381 395 - -
Gso4g1625 646 MobiDBLite consensus disorder prediction 479 519 - -
Gso4g1625 646 MobiDBLite consensus disorder prediction 476 524 - -
Gso4g1625 646 Pfam Galactose oxidase, central domain 431 473 - -
Gso4g1625 646 Pfam Galactose oxidase, central domain 68 122 - -
Gso4g1625 646 MobiDBLite consensus disorder prediction 12 35 - -
Gso4g1625 646 Pfam Galactose oxidase, central domain 135 187 - -
Gso4g1625 646 Pfam Kelch motif 235 297 - -
Gso4g1625 646 Gene3D - 42 372 IPR015915 GO:0005515
Gso4g1625 646 Coils Coil 364 384 - -
Gso4g1625 646 MobiDBLite consensus disorder prediction 624 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1625 Gso-Chr4 46023223 46031870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1625 117 640 Acyl Lipid Metabolism Gene Families AT3G05420 21.627 4.42e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1625 - - gmx:100818228 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1625 4 46023223 46031870 Gso6g1462 6 14600689 14619012 GST