Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1439 ATGGCACCGCATGATCTCCGCCGTCCGTTCAAGCGACCAGCGATCTCCGATCAAGAGCGGCGCAGGGAACAGTCTCTGCTCCGCCAGGCACAGAGTCGCCAAGACGCCCAGCGCCACGCGCGCTTCTTGGCCTCCGCCGCACTCTCTCTCCCACCCAAAACCCCCGAACCAGAATCCGAACCCAAACCCGAACTCGCGGAAACCGAAGCCAGTTCGGATTCCGGCTACGAGAGCGTCGACATCGTTGGAGCGTCGACGCTTTCAGCTGCGGAAGCTCGCAAGTGGTTCGCGAAGCAGCTCATGCACCCGGAGTGGATGATCGACATCCCCAACAACCTCGCCCAAGACTGGTTCGTCTTCGCTCGCCCTTCCGGGAAACGGTGCTTCGTCGTTTCGTGCAACGGAACGACGATAAGTCGTTTGCGGAACGGTGCCATTCTGCATCGGTTTCCCTCCGCCTTGCCTAGCGGGGCAAGGAAGAAGGACCCCTCCTACTCTATACTGGACTGCATCTTTCACGAGGTGGATCAGACTTATTACGTTATTGACATGGTTTGTTGGCGGGATTACCCTCTGTCTGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGACCTCGAAGCTTGCAGAGACTGGTGCCTTTGACCCTCCCTCGTATTATCACAAGTATAGGTTCAGTTTGGTTCCCGTGTATAGTTGTGACTCGAGTGGTCTCTATGCTGCGTATTCAGCACCAGTGCCTTATGTCAAAGACGGTCTTCTTTTTTATAACAAGCATTCTCACTACCAAGCAGGAATTACGCCGTTAGCATTAGTTTGGAAGGACGAGAACTGTAGTCAATATGTTTTGGACACAGACAGTAAAGGACAGGTTCCAAACCAACAGCAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTGACTACCTCAGATGATCCTCCTGTGGTGTTTGGCTGTTTAGATGGAAGCTTTATACAACAGTCAGGGCTGCATTCAGGATGTCTTCTACGGTTTTCAATTGGAGAGGGAGGATTTGTTTTGATGGATGGGAAGCTTGAGAAAGCCGATCTACATTATCTTGGCAAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAACACAGTGTTCGACACTCTCCCCTCAGAATTGAAGGTCTGCTGGAATCTGTCGGTTTACCAGTTGATCAAGAAAGCAAAGCTTGTGATGTTGAGATGGATGGTTGA 1242 0.5153 MAPHDLRRPFKRPAISDQERRREQSLLRQAQSRQDAQRHARFLASAALSLPPKTPEPESEPKPELAETEASSDSGYESVDIVGASTLSAAEARKWFAKQLMHPEWMIDIPNNLAQDWFVFARPSGKRCFVVSCNGTTISRLRNGAILHRFPSALPSGARKKDPSYSILDCIFHEVDQTYYVIDMVCWRDYPLSDCTAEFRFFWLTSKLAETGAFDPPSYYHKYRFSLVPVYSCDSSGLYAAYSAPVPYVKDGLLFYNKHSHYQAGITPLALVWKDENCSQYVLDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFIQQSGLHSGCLLRFSIGEGGFVLMDGKLEKADLHYLGKANRARASADSFSKVMFQHSVRHSPLRIEGLLESVGLPVDQESKACDVEMDG* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1439 413 CDD Snurportin-1_C 95 276 - -
Gso6g1439 413 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 412 IPR017336 GO:0005634|GO:0005737|GO:0061015
Gso6g1439 413 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 95 274 - -
Gso6g1439 413 MobiDBLite consensus disorder prediction 1 28 - -
Gso6g1439 413 Gene3D DNA ligase/mRNA capping enzyme 2 301 - -
Gso6g1439 413 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1439 Gso-Chr6 14345797 14351746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1439 K13151 - gmx:100801927 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1439 6 14345797 14351746 Gso6g1439 6 14345797 14351746 ECH
Gso4g1651 4 46317181 46323601 Gso6g1439 6 14345797 14351746 GST