Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1651 ATGGCACCGCACGATCTCCACCGTCCGTTCAAGCGACCGGCGATCTCCGATCAAGAGCGGCGCAGGGAACAGTCTCTGCTCCGCCAGGCACAGAATCGCCAAGACGCCCAGCGCCACGCGCGCTTCTTGGCCTCAGCCGCACTCTCTCTCCCACCCCAATCCTCCGAACCAGAATCCGAACCAAAACCCGAACCCGAATTCGAACTCGCGGAATTCGAAGCCGGTTCGGATTCCGGCTACGAGAGCCTCGACGTCATCGGAGCGTCGAAGCTGAAAGCCGTGGAAGCTCGCAAGTGGTTCGCGAAGCAGCTCATGCTCCCCGAGTGGATGATCGATATTCCCAACAACCTCGCTCAAGACTGGTTCGTCTTCGCTCGCCCTTCCGGGAAACGGTGTTTCGTCGTTTCGTACAACGGAACGACGATAAGCCGTCTGCGGAACGGTGCCGTTCTGCATCGGTTTCCCTCCGGCTTGCCGAGCGGGGCAAGGAAGAGGGACCCCTCCTACTCTATATTGGACTGCATCTTTCACGAGGCGGATCAAACTTATTACGTTATTGACATGGTTTGTTGGCGGGGTTACCCTCTGTCTGATTGCACCGCGGAGTTTAGGTTCTTCTGGTTGACCTCGAAGCTTGCAGAAACTGATGCCTTTGAACCTCCCTCGCATTATCACAAGTACAGGTTTAGTTTGGTTCCGGTGTTTAATTGTGATTCGAATGGTCTCTATGCTGCTTATTCAGCACCAGTGCCTTATGTCAAAGACGGTCTTCTTTTTTATAACAAGCATGCTCACTATCAGGCAGGAATTACGCCGTTAGCATTAGTTTGGAAGGATGAGAACTGTAGTCAATATGTTTTGGACACAGACAGTAAAGGACAGGTTCCAAACCAACAGCAGGTGGTTTTGGAGCTTCAAGACGATGGAAAACTGACTACCTCGGATGATCCTCCTATGTTATTTGGCTGTTTAGATGGAAGCTTTATACAACAGTCAGGTTTGCATTCAGGATGTCTTCTACGGTTTTCAATTGGAGAGGGAGGATTAGTTTTGATGGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTGGCAAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTTTCTAAGGTTATGTTCCAACACAGTGTTCGACACTCTCCCCTCAGAATTGATGGTCTGCTGGAATCTGTCAGTTTACCAGTTGATCAAGAAAGCAAAGCTTGTGATATTGAGATGGATGGTTGA 1254 0.504 MAPHDLHRPFKRPAISDQERRREQSLLRQAQNRQDAQRHARFLASAALSLPPQSSEPESEPKPEPEFELAEFEAGSDSGYESLDVIGASKLKAVEARKWFAKQLMLPEWMIDIPNNLAQDWFVFARPSGKRCFVVSYNGTTISRLRNGAVLHRFPSGLPSGARKRDPSYSILDCIFHEADQTYYVIDMVCWRGYPLSDCTAEFRFFWLTSKLAETDAFEPPSHYHKYRFSLVPVFNCDSNGLYAAYSAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVLDTDSKGQVPNQQQVVLELQDDGKLTTSDDPPMLFGCLDGSFIQQSGLHSGCLLRFSIGEGGLVLMDGKLEKADLHYLGKANRARASADSFSKVMFQHSVRHSPLRIDGLLESVSLPVDQESKACDIEMDG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1651 417 CDD Snurportin-1_C 99 280 - -
Gso4g1651 417 MobiDBLite consensus disorder prediction 1 70 - -
Gso4g1651 417 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 99 278 - -
Gso4g1651 417 MobiDBLite consensus disorder prediction 1 28 - -
Gso4g1651 417 Gene3D DNA ligase/mRNA capping enzyme 2 305 - -
Gso4g1651 417 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 416 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1651 Gso-Chr4 46317181 46323601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1651 K13151 - gmx:100786485 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1651 4 46317181 46323601 Gso6g1439 6 14345797 14351746 GST