Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1434 ATGAGAAGGCCATGGAAGCATTCTAAGAACAAACATGATCTCTTTGAATGTCTTCCGGACGATCTCGTTGTTCTTATTCTTTCCAAGCTCAGCGCCACCGCTTCATCTCCTTCCGATTTCATCAACATCATCTTAACATGCAAGAGGCTAAACCGCTCAGGCCTGCACCGTCTTGTGTTGTCTAAAGCTGGGCCCAAAGTATTCGCCATAAAGCCGAAAAATTGGTCAGAATATGCTCACTCTTTTCTCAAACACTGCGTCAATGCCGGTAACGTGGATGCCTGTTACACTCTCGGAATGATCCGATTTTACTGTTTGAAAAACCGAGGGAGCGGGCTCTCGTTAATGGCGAAGGCGGCTATGAAGCTGCACGCGCCGGCGCTGTACTCGCTGGCAGTGATTCAGTTCAACGGCAGCGGCGGTTCAAAGCGCGATAAAGATCTACGCGCTGGCGTGGCCTTGTCGGCGCGTGCATCTTTGCTCGGCCACATCGACGCGCTTCGGGAGTTAGGCCATTGCCTTCAAGACGGATACGGCGTGCGGCAGAACGTCACCGAGGGGAGAAGGCTCCTCGTGCAGGCCAACGTGCGCGAGCTCGCGTATGTCCTACGCGCCGTGGCGCCTCCTTCGCGCTGCTGCGACGAGTCCTCCTCGCTGCTGACGTGGGGCGCGCTGAGATGTCAGAGAAAAAACAACAACGCGGTGTCATCACTGGCGTGTCCGTTGCTGAGTGATTACGGTTACAGCGTGGCGCCGCCGGAAGTGCAACCGGCGAATTGGTTTCTGAGAGAGTGGTTTGAGTCAGGTAAGGGGAAATTAGAAGAAGGACTGAGGCTTTGCGCGCACATTGGGTGCGGTCGACCGGAGACGCGGCCACACGAGTTTCGCCGGTGTTCGGTTTGCGGCAAAGTGAATTACTGTTCACGTGGATGTCAGGCGCTGGATTGGAAGTTGCGGCATAAGATTGAGTGTTCGCCGGTGGAAATGTACGGTGATGGTGGTGTTGATGTGGAGAATGAGTTTGTGGTCCCAAACGATGCCGTTTGA 1047 0.5463 MRRPWKHSKNKHDLFECLPDDLVVLILSKLSATASSPSDFINIILTCKRLNRSGLHRLVLSKAGPKVFAIKPKNWSEYAHSFLKHCVNAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRRLLVQANVRELAYVLRAVAPPSRCCDESSSLLTWGALRCQRKNNNAVSSLACPLLSDYGYSVAPPEVQPANWFLREWFESGKGKLEEGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKIECSPVEMYGDGGVDVENEFVVPNDAV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1434 348 Gene3D Tetratricopeptide repeat domain 57 205 IPR011990 GO:0005515
Gso6g1434 348 Gene3D - 271 328 - -
Gso6g1434 348 SUPERFAMILY HIT/MYND zinc finger-like 278 327 - -
Gso6g1434 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 332 - -
Gso6g1434 348 ProSiteProfiles Zinc finger MYND-type profile. 282 324 IPR002893 -
Gso6g1434 348 SUPERFAMILY HCP-like 77 194 - -
Gso6g1434 348 SUPERFAMILY F-box domain 8 61 IPR036047 GO:0005515
Gso6g1434 348 PANTHER MYND DOMAIN-CONTAINING 6 332 IPR044508 -
Gso6g1434 348 Pfam MYND finger 285 324 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1434 Gso-Chr6 14298915 14300510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1434 - - gmx:100820040 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1652 4 46340870 46342607 Gso6g1434 6 14298915 14300510 GST