Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1652 ATGAGAAGGCCTTGCAAACATTCTAAGAAGAAACATGATCTCTTTGAATGCCTCCCTGACGATCTCCTTGTCCTTATTCTTTCTAAGCTCAGCTCCACCGCTTCTTCTCCTTCTGATTTCATCAACATCATCTTAACATGCAAGAGGTTAAACCGGTTAGGCCTGCACCGTCTTGTGTTATCCAAAGCTGCCTCTAAACTATTCGCCATAAAACCGAAAAATTGGTCGGAATATGCTCACTCTTTTCTCAAACACTGCGCTAACGCCGGTAACGTGGATGCCTGTTACACTCTCGGAATGATCCGATTTTACTGTTTGAAAAATCGAGGGAGCGGACTCTCGTTAATGGCGAAGGCGGCCATGAAGCTGCACGCGCCGGCTCTGTACTCGCTGGCGGTGATTCAGTTCAACGGCAGCGGCGGTTCGAAGCGCGACAAGGATCTACGCGCGGGCGTGGCCTTGTCGGCGCGTGCGTCGTTACTCGGCCACATCGACGCGCTTCGGGAGTTAGGCCATTGCCTTCAAGACGGTTACGGCGTGCGGCAGAACGTCACGGAGGGGAGGCGGCTACTCGTGCAGGCCAACGTGCGCGAGCTCGCGTACGTCCTACGCGCCGTGGCGCCTTCGCGCTGCTACGAGACCTCGCTGCTGACGTGGCGCGCGCTGAGATGTCAGAGAAACAACAACAACAACAACGCGGTGGTGGCATGTCCTTTGCTGAGTGATTATGGTTACAACGTGGCGGCGCCGGAGGTGCAGCCGGCGAATTGGTTTCTGAGAGAGTGGTTTGAGTCCGGTAAGGGAAAATTGGAGGAAGGACTAAGGCTTTGCGCGCACATTGGGTGTGGCCGACCGGAGACGCGGCCGCACGAGTTTCGCCGGTGTTCGGTTTGCGGCAAAGTGAATTACTGTTCTCGTGGATGTCAGGCGCTGGATTGGAAGTTGCGGCATAAGATGGAGTGTTCGCCGGTGGAAATGTACGATGGTGGTGTGGATGGAGAGGATGAGTTTGTGGTCCCAAACGATGCCGTTTGA 1035 0.5488 MRRPCKHSKKKHDLFECLPDDLLVLILSKLSSTASSPSDFINIILTCKRLNRLGLHRLVLSKAASKLFAIKPKNWSEYAHSFLKHCANAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRRLLVQANVRELAYVLRAVAPSRCYETSLLTWRALRCQRNNNNNNAVVACPLLSDYGYNVAAPEVQPANWFLREWFESGKGKLEEGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPVEMYDGGVDGEDEFVVPNDAV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1652 344 Gene3D Tetratricopeptide repeat domain 55 206 IPR011990 GO:0005515
Gso4g1652 344 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 336 - -
Gso4g1652 344 SUPERFAMILY HCP-like 77 194 - -
Gso4g1652 344 Gene3D - 268 325 - -
Gso4g1652 344 PANTHER MYND DOMAIN-CONTAINING 6 336 IPR044508 -
Gso4g1652 344 SUPERFAMILY F-box domain 10 70 IPR036047 GO:0005515
Gso4g1652 344 ProSiteProfiles Zinc finger MYND-type profile. 279 321 IPR002893 -
Gso4g1652 344 Pfam MYND finger 282 321 IPR002893 -
Gso4g1652 344 SUPERFAMILY HIT/MYND zinc finger-like 275 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1652 Gso-Chr4 46340870 46342607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1652 - - gmx:100781713 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1652 4 46340870 46342607 Gso6g1434 6 14298915 14300510 GST