Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1423 ATGGAGAAGCCATCGTCGTCGCGAAGAAAATCGAGCACGATGGTGAAAGCTTCAACTGATGCGAACACAAGCCTGAGCATGCTGAACGAGGACCTTCTTCAGAACATTCTAGCGAGGCTTCCTTCTCTACACTTCGCTTCCGCAGCTTGCGTCAGCAAATCATGGAACTCTCTCTGCAGTCGCATCCTCTCTCGCCCCAAGCTCTCTTCGGCGATCTCTCTCAACCCTTCGCTCCCCGATGCTGTCAACGAGGTTGTTCACAAGGTTCTCTCGGAGCCAATTCGACCCCATTTTGCTATTGCCAATATCGGAACTGGATTCAACACTGCCAAGACTCTGTGCCTTATTAGAAAGTCGTTGGGGTTCAATATTCCTGTTATTGTTACCGTGGCGAATGGTATTATGGGAAGGGATGCTGTAACCGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGCGGCTTTGGCGAGGAATCATATACGAGGTTTATAAACGAAGGCTTAGTTTTGACTGTTGGGTACTTGCCTGGATTGAAAGTTGAAGCATTGCCGTTGCGACGGCCAACAAAGACATCGCAAGCAACATGGGTTGACAATTTCATAAAGGATATTAAGGAATATTCAGCCTCTGTCTCCAGTAGCCCTTTCCCTGTTGGGATTATATTGTTTGGAGAAGCAAGCTGTGACATGAAATTGGTTCTGGAGAAATTGGATCATGCCATGCCTATGGACATGGTCATTGTGGGTGATGAGAGAGGCTCTTTTGACTTTGTACACAAAAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAAAGGAAACATAGAAGCTGTTGCTCTTGTATTTGCTCAGGACAGGGACAGGTCTTTGGGAACTATTAGGTTTCATGTTGCATTGTCAAATGGTGTTTCCACTGTGGGTCCCAGATACAAGGCAGCCTCAGTTAAATCAAACAGTGCTGATTGTTCAACATGGCTAACTGCTAGGAGGGAAGGGCAACAGGAAAATCTTGACGGTCAGAGTATTCTACTTGATATCAACAATTTGCTGGACAATCATATTGAGTCTCCTGATTTGTACATTGGGGTAATTAAACATAGGAAATTATCCACTGGAGCAGAGAAGCCAATGCCAAGAACTTGTATTGCATATCATGGAGTTGTGGGAGGTGATGAAGAGTATCTATATGTTGATGGCATTGGCATAAAAACAGGAGATATCTTTCAGTTCTACTATTCAGATCCTAATACTGCCTTAGCTTCATTAACCAAGGTCCATGATGCCCTCAAGAGTATTCATCTGGAAAAAAATTCCAAGAGTTCCAAGGGTGATGGAGACAACGCTACCAATGTTTTTGGGGGTATTGTTTTTGCTTGTTACGGCCGTGGTGAATCCTTCTTTGGACGTCACAATGTTGACAGCTCTCCTTTCCTAGAGAATTTTCCAGGAGTGCCAGTGTCTGGAATATTTTGTGGTGGAGAAATGGTGCGTCCTTGTACCACTGTGATTGGTCAATGTGAAGGAGCAAGCCCCATTAGTTGCTGTCTGCATGTTTACAGCACTGTCTACTTAGCAATGTCATATACTCCTCCCTCTGTGGAAGATTAG 1611 0.4438 MEKPSSSRRKSSTMVKASTDANTSLSMLNEDLLQNILARLPSLHFASAACVSKSWNSLCSRILSRPKLSSAISLNPSLPDAVNEVVHKVLSEPIRPHFAIANIGTGFNTAKTLCLIRKSLGFNIPVIVTVANGIMGRDAVTDEFKEVKWGALFSGFGEESYTRFINEGLVLTVGYLPGLKVEALPLRRPTKTSQATWVDNFIKDIKEYSASVSSSPFPVGIILFGEASCDMKLVLEKLDHAMPMDMVIVGDERGSFDFVHKSGNDSRIICSKKGNIEAVALVFAQDRDRSLGTIRFHVALSNGVSTVGPRYKAASVKSNSADCSTWLTARREGQQENLDGQSILLDINNLLDNHIESPDLYIGVIKHRKLSTGAEKPMPRTCIAYHGVVGGDEEYLYVDGIGIKTGDIFQFYYSDPNTALASLTKVHDALKSIHLEKNSKSSKGDGDNATNVFGGIVFACYGRGESFFGRHNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSVED* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1423 536 SUPERFAMILY F-box domain 23 60 IPR036047 GO:0005515
Gso6g1423 536 SMART fbox_2 28 68 IPR001810 GO:0005515
Gso6g1423 536 SMART FIST_C_2 343 499 IPR019494 -
Gso6g1423 536 Pfam FIST C domain 402 497 IPR019494 -
Gso6g1423 536 Pfam F-box domain 25 63 IPR001810 GO:0005515
Gso6g1423 536 PANTHER F-BOX ONLY PROTEIN 22 24 535 - -
Gso6g1423 536 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 24 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1423 Gso-Chr6 14180173 14186644 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1423 - - gmx:100815778 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1663 4 46461337 46469368 Gso6g1423 6 14180173 14186644 GST