Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1663 ATGGAGAAGCCATCGTCGTCGCGAAGAAAATCGAGCACGAAGGTGAAAGCTTCAACCGATGCGAACACGAACCTGAGCATGCTCAACGAGGACCTTCTCCAGAACATTCTAGCGAGGCTTCCTGCTCTGCATTTCGCTTCCGCAGCTTGCGTCAGCAAATCATGGAACTCTCTCTGCAATCGCATCCTCACTCGCCCCAAACTCTCTTCCGCGATTTCTCTCAACCCTTCGCTCCCCGATGCTGTCAACGAGGTTGTTCACAAGGTTCTTTCGGAGCCAATTCGACCCCATTTCGCTATTGCCAATATCGGAACTGGATTCAGCACTGCCAAGACTTTGTGCCTTATTAGACAGTCGTTGGGATCCAATATTCCTGTTATTGTTACCGTTGCGAGTGGTATTATGGGAAGGGATGCTGTAACCGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGTGGCTTTGGCGAGGAATCGTATACGAGGTTTATAAACGAAGGCTTAGTTTTGACTGTTGGGTACTTGCCTGGATTGAAAGTTGAAGCAGTGCCCTTGCGACGGCCGACAAAGACGCAAGCAATATGGGTTGACAATTTCATAAAGGATATTAAGGAATATTCAGCCTCTGTCTCCAGTAGCCCATTCCCTGTTGGGATTATATTGTTTGGAGAAGCAAGCAGTGACATGAAATTGGTTCTGGAGAAATTGGATCATGCCATGCCTATGGACACGGTCATTGTGGGTGATGAGAGAGGCTCCTTTGACTTTGTACACAAAAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAAAGGAAACATAGAAGCTGTTGCTCTTGTATTTGCTCGGGACAGAAACAGGTCTTTGGGAACTATTAGGTTTCATGTTGCATTGTCAAATGGTGTTTCAACTGTGGGTCCCAGATACAAGGCAGCCTCAGTTAAATCAAACAATGCTGATTGTTCAACATGGCTAACTGCTAGGAGGGAAGGGCAACAGGAAAATCTTGATGGTCAGAGTATTCTACTTGATATCAACAATTTGCTGGACAATCATGTTGAGTCTCCTGATTTGCACATTGGGGTAATTAAACATAGGAAATTATCCACTGGAGCAGAGAAGCCAATGCCAAGAACTTGTATTTCATATCATGGAGTTGTGGGAGGTGATGAAGAGTATCTATATGTTGACGGCATTGGCATAAAAACAGGAGATTTCTTTCAGTTCTACTATTCAGATCCAAATATTGCCTTAGCTTCATTAACCAAGGTCCATGATGCTCTCAAGAGTATTAAACTGGAAAAAAAATCCAAGAGTTCCAAGGGTGATGGAGACAACGCTACCAATGTTTTTGGGGGTATTATTTTTGCTTGTTACAGCCGTGGTGAATCCTTCTTTGGACGTCAGAATGTTGATAGCTCCCCTTTCTTGGAGAATTTTCCAGGAGTGCCAGTGTCTGGAATATTTTGTGGTGGAGAAATGGTGCGTCCTTGTACCACTGTGATTGGTCAATGTGAAGGAGCAAGCCCCATTAGTTGCTGTCTGCATGTGTACAGCACTGTCTACTTAGCAATGTCGTATACTCCCCCCTCTGTGGAAGATTAG 1608 0.444 MEKPSSSRRKSSTKVKASTDANTNLSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAVNEVVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTDEFKEVKWGALFSGFGEESYTRFINEGLVLTVGYLPGLKVEAVPLRRPTKTQAIWVDNFIKDIKEYSASVSSSPFPVGIILFGEASSDMKLVLEKLDHAMPMDTVIVGDERGSFDFVHKSGNDSRIICSKKGNIEAVALVFARDRNRSLGTIRFHVALSNGVSTVGPRYKAASVKSNNADCSTWLTARREGQQENLDGQSILLDINNLLDNHVESPDLHIGVIKHRKLSTGAEKPMPRTCISYHGVVGGDEEYLYVDGIGIKTGDFFQFYYSDPNIALASLTKVHDALKSIKLEKKSKSSKGDGDNATNVFGGIIFACYSRGESFFGRQNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSVED* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1663 535 SMART FIST_C_2 342 498 IPR019494 -
Gso4g1663 535 Gene3D - 9 63 - -
Gso4g1663 535 SUPERFAMILY F-box domain 23 61 IPR036047 GO:0005515
Gso4g1663 535 Pfam FIST C domain 401 496 IPR019494 -
Gso4g1663 535 SMART fbox_2 28 68 IPR001810 GO:0005515
Gso4g1663 535 Pfam F-box domain 25 62 IPR001810 GO:0005515
Gso4g1663 535 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 24 534 - -
Gso4g1663 535 Pfam FIST N domain 114 318 IPR013702 -
Gso4g1663 535 PANTHER F-BOX ONLY PROTEIN 22 24 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1663 Gso-Chr4 46461337 46469368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1663 - - gmx:100786866 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1663 4 46461337 46469368 Gso6g1423 6 14180173 14186644 GST