Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1419 ATGGCGGCAATCAGCAACATCAGTTTGCAATTTCCAGGGAATTTAACCGATGCAAAGAAGGATAATAATGTTTTGAGGCTTAGCTTTTGTTCTCCACGCAACACTACCAACATGTCTAGTGAAAAACGAAGATTTTTATCGGTAAGTGCAAGTTACAGTGATAGTCCTCGAAAAATAGACACGGCAAATAGAGTGAATGTGAATGGAATACATGTGGCAGAGGCTCCTCTACAAGCAGGGAAATTGGCAAATGATCCAAGTGCAGCAGATGAAGCTATTGTTACCAGCTTGCGTGGAAGGTTTGTGGAGGGTAAGTTTGTATTTAGGCAAATTTTTGTTATCAGGTCTTATGAAATTGGACCAGATAAAACTGCCACAATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTCACCAGCTCTGGGATTGGTGGAGAAGGATTTGGAGCAACCCGCGAGATGAGCCTTAGAAAACTCATTTGGGTGGTTACTCGTATTCAAGTTCAAGTGCAAAGATATAACAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTCGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCATTACAGCAAAGAGATCATAACAAGAGCAACAAGCACATGGGTAATCATGAATAGACAAACAAGAAGACTATCCAAGATCCCTGAAGAGGTTAAGCAAGAGCTGCTTCCTTTTTATCTTAACAGGCTTGCCGTTCCTACCGAAGAAACAGATTGTGAAAAGATAGACAAACTCACTGATGAGACTGCTCAGATCAGAATCCTATCTGGACTGGCTCCAAGGTGGAATGACATGGATGCTAACCAGCATGTCAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATTGAAGTGCTAGAACATTATAACATGACAAGCATGACTTTGGAGTTTCGGCGTGAATGTACACAATCAAATTTGTTGGAATCCATGACATGTCCAACAGCAAGAGTTATGGAATCCAATAATAATTCCAAGAATAGAAAACCCGACATGCAATACACACACTTGCTTCGTCTGCAACAAGATAAAGCAGATGTTGTCCGAGCCAGAACTGAATGGAATTTTAAGCAAAAGCATCAGTGA 1152 0.4071 MAAISNISLQFPGNLTDAKKDNNVLRLSFCSPRNTTNMSSEKRRFLSVSASYSDSPRKIDTANRVNVNGIHVAEAPLQAGKLANDPSAADEAIVTSLRGRFVEGKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQVQVQRYNKWGDEIEVDTWVDAAGKNGMRRDWIIRDHYSKEIITRATSTWVIMNRQTRRLSKIPEEVKQELLPFYLNRLAVPTEETDCEKIDKLTDETAQIRILSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTSMTLEFRRECTQSNLLESMTCPTARVMESNNNSKNRKPDMQYTHLLRLQQDKADVVRARTEWNFKQKHQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1419 383 Pfam Acyl-ACP thioesterase 107 377 IPR002864 GO:0006633|GO:0016790
Gso6g1419 383 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 277 376 IPR029069 -
Gso6g1419 383 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 14 382 - -
Gso6g1419 383 CDD 4HBT 108 224 - -
Gso6g1419 383 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 105 249 IPR029069 -
Gso6g1419 383 Gene3D Hotdog Thioesterase 99 382 - -
Gso6g1419 383 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 14 382 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1419 Gso-Chr6 14108821 14111846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1419 99 379 Acyl Lipid Metabolism Gene Families AT1G08510 55.516 9.22e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1419 K10781 - gmx:100814191 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1419 6 14108821 14111846 Gso6g1419 6 14108821 14111846 ECH
Gso4g1666 4 46543182 46545839 Gso6g1419 6 14108821 14111846 GST