Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1410 ATGGCCATCAACCATGAAACTTGGGCTTTCATTTTCGGTCTTCTAGGCAACGTGATCTCCTTTATGGTGTTCCTCGCTCCATTACCAACTTTTTACCAAATCTACAAGAAAAAATCTACGGATGGGTTTCAATCACTACCTTATATTGTTGCACTATTCAGTTCAATGCTCTGGATTTATTACGCACTCGTCAAAAAGGATGCTAGCCTCCTTCTCATTACTATTAACTCCTTTGGATGTGTGATAGAGACGATATACCTTGCAATCTTCCTAATTTACGCCCCAAGCAAAACCAGGCTTTGGACCATCAAGCTTCTTCTCATGTTGAATGTTTTTGGATTCGGAGCAATGCTTCTTTCAACCCTCTACCTTACAACGGGTTCCAAACGTCTTTCTGTGATAGGATGGATTTGCCTTGTTCTCAACATAAGCGTTTTTGCTGCTCCTCTTTGCATCATGAAACGTGTCATAAAGACGAAGAGTGTGGAATTCATGCCTTTCAGTTTGTCCTTCTTTTTGACCATAAATGCTGTCATGTGGTTCTTCTATGGCCTTCTCCTCAAGGACTACTACATCGCACTCCCAAATACTCTTGGGTTTCTATTCGGCATAATCCAGATGGTGCTGTATTTGATTTATAGAAACGCCAAGCCACAAGGATTGGAGGAGCCAACGAAGGTTCAGGAACTAAATGGCCATATTATTGACGTTGTGAAGCCGAATCATGTAACAAAAAATGGTCCTGTGCCTGTGATTGAGACAGCTAGCAATGTGTGA 777 0.417 MAINHETWAFIFGLLGNVISFMVFLAPLPTFYQIYKKKSTDGFQSLPYIVALFSSMLWIYYALVKKDASLLLITINSFGCVIETIYLAIFLIYAPSKTRLWTIKLLLMLNVFGFGAMLLSTLYLTTGSKRLSVIGWICLVLNISVFAAPLCIMKRVIKTKSVEFMPFSLSFFLTINAVMWFFYGLLLKDYYIALPNTLGFLFGIIQMVLYLIYRNAKPQGLEEPTKVQELNGHIIDVVKPNHVTKNGPVPVIETASNV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1410 258 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 247 - -
Gso6g1410 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Gso6g1410 258 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Gso6g1410 258 PANTHER RAG1-ACTIVATING PROTEIN 1 4 247 - -
Gso6g1410 258 Gene3D - 11 98 - -
Gso6g1410 258 Gene3D - 128 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1410 Gso-Chr6 14014395 14017176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1410 1 247 Miscellaneous Gene Families AT5G50790 54.435 5.31e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1410 K15382 - gmx:100810962 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1410 6 14014395 14017176 Gso6g1410 6 14014395 14017176 ECH
Gso4g1674 4 46673792 46676714 Gso6g1410 6 14014395 14017176 GST
Gso5g1724 5 40515219 40517674 Gso6g1410 6 14014395 14017176 PCT
Gso8g0083 8 786619 789151 Gso6g1410 6 14014395 14017176 PCT
Gso6g1410 6 14014395 14017176 Gso5g1724 5 40515219 40517674 PCT
Gso6g1410 6 14014395 14017176 Gso8g0083 8 786619 789151 PCT