Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1724 ATGGCTCACGCCAATCCTATGATTTTTGTTGTTGGAATTCTAGGTATCTACACAAGAAAGCTAAATCACATTATCTTCTTTACACCAGTACCAACATTTTATCGAGTTTGTAAGAAGAAAACCACGGAAGGTTTCCAATCACTTCCTTACGTGGCTGCACTCTTCACTTCAATGCTTTGGATTTTTTATGCGTACATAAAGACGGGCGAAATACTTCTTATCACCATTAACGCATTCGGTTGTTTCATAGAGACAGTTTACCTTGTCATTTATATCATTTATTGCCCCAAGAAAGCTAGGTTCTTTACCTTCAAGATGATTTTCTTGTTCAACGTTGGGGTGATTTTCTTGGTGGTTCTTCTTACCCACGTTCTAGCAAAAGAACGAACAGCCCGTATCGAGCTTCTTGGATGGATTTGTGTTGTCCTTTCGACCAGTGTGTTTGCAGCACCTTTAAGCATTATCAAAGTGGTTATTCGTACCAAAAGTGTAGAGTTCATGCCTATTACTCTGTCACTCCTCCTCACAGTAAGTGCAACGATGTGGATGGCATACGGTATTCTCCTCAGGGACATCTATGTTACACTTCCGAACTTTGTGGGTATCACATTTGGAACGATTCAGATAGTGCTCTACTTAATATATAGAAAGAGCAAGCCCGTTAAGGATCAAAAGCTGCCAGAACACAAAAACCATGTTGTTAACGATGAAAACGCCAGCACAGCTGTGAGTGGTGAGAATCAGGGACCAAACACTACTGGATTCGTTGATATTGAGATTGGAGAGAAGAAGCAAGTTCAGGAACAAGCAGAGAAAAAACAGGACCAGCAGTTTGTTAATGCTCGTGACCAAACAGAACACAACAAAACAAGGGAAAGTTGA 882 0.407 MAHANPMIFVVGILGIYTRKLNHIIFFTPVPTFYRVCKKKTTEGFQSLPYVAALFTSMLWIFYAYIKTGEILLITINAFGCFIETVYLVIYIIYCPKKARFFTFKMIFLFNVGVIFLVVLLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSLLLTVSATMWMAYGILLRDIYVTLPNFVGITFGTIQIVLYLIYRKSKPVKDQKLPEHKNHVVNDENASTAVSGENQGPNTTGFVDIEIGEKKQVQEQAEKKQDQQFVNARDQTEHNKTRES* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1724 293 MobiDBLite consensus disorder prediction 261 293 - -
Gso5g1724 293 Gene3D - 8 105 - -
Gso5g1724 293 Gene3D - 131 226 - -
Gso5g1724 293 MobiDBLite consensus disorder prediction 236 254 - -
Gso5g1724 293 MobiDBLite consensus disorder prediction 226 293 - -
Gso5g1724 293 PANTHER RAG1-ACTIVATING PROTEIN 1 5 293 - -
Gso5g1724 293 Pfam Sugar efflux transporter for intercellular exchange 135 219 IPR004316 GO:0016021
Gso5g1724 293 Pfam Sugar efflux transporter for intercellular exchange 14 99 IPR004316 GO:0016021
Gso5g1724 293 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1724 Gso-Chr5 40515219 40517674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1724 5 228 Miscellaneous Gene Families AT5G23660 51.724 1.59e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1724 K15382 - gmx:100801430 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1724 5 40515219 40517674 Gso8g0083 8 786619 789151 GST
Gso5g1724 5 40515219 40517674 Gso4g1674 4 46673792 46676714 PCT
Gso5g1724 5 40515219 40517674 Gso6g1410 6 14014395 14017176 PCT
Gso4g1674 4 46673792 46676714 Gso5g1724 5 40515219 40517674 PCT
Gso6g1410 6 14014395 14017176 Gso5g1724 5 40515219 40517674 PCT